Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 AC079776.4-201ENST00000511039 504 ntBASIC14.24□□□□□ -0.13
GAFA1Q96PS6 AC008667.4-201ENST00000607370 168 ntBASIC14.24□□□□□ -0.13
GAFA1Q96PS6 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC14.24□□□□□ -0.13
GAFA1Q96PS6 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
GAFA1Q96PS6 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC14.24□□□□□ -0.13
GAFA1Q96PS6 AF228730.7-201ENST00000641842 219 ntBASIC14.24□□□□□ -0.13
GAFA1Q96PS6 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC14.24□□□□□ -0.13
GAFA1Q96PS6 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
GAFA1Q96PS6 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
GAFA1Q96PS6 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
GAFA1Q96PS6 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
GAFA1Q96PS6 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC14.24□□□□□ -0.13
GAFA1Q96PS6 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
GAFA1Q96PS6 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
GAFA1Q96PS6 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
GAFA1Q96PS6 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC14.24□□□□□ -0.13
GAFA1Q96PS6 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC14.24□□□□□ -0.13
GAFA1Q96PS6 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
GAFA1Q96PS6 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
GAFA1Q96PS6 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
GAFA1Q96PS6 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
GAFA1Q96PS6 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC14.24□□□□□ -0.13
GAFA1Q96PS6 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
GAFA1Q96PS6 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
GAFA1Q96PS6 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
GAFA1Q96PS6 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC14.23□□□□□ -0.13
GAFA1Q96PS6 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
GAFA1Q96PS6 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC14.23□□□□□ -0.13
GAFA1Q96PS6 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
GAFA1Q96PS6 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
GAFA1Q96PS6 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
GAFA1Q96PS6 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
GAFA1Q96PS6 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC14.23□□□□□ -0.13
GAFA1Q96PS6 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC14.23□□□□□ -0.13
GAFA1Q96PS6 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
GAFA1Q96PS6 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
GAFA1Q96PS6 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
GAFA1Q96PS6 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC14.23□□□□□ -0.13
GAFA1Q96PS6 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
GAFA1Q96PS6 IGHV3-65-201ENST00000523210 341 ntBASIC14.23□□□□□ -0.13
GAFA1Q96PS6 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
GAFA1Q96PS6 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC14.23□□□□□ -0.13
GAFA1Q96PS6 DUX4L17-201ENST00000557360 1267 ntBASIC14.23□□□□□ -0.13
GAFA1Q96PS6 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC14.23□□□□□ -0.13
GAFA1Q96PS6 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC14.23□□□□□ -0.13
GAFA1Q96PS6 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
GAFA1Q96PS6 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC14.23□□□□□ -0.13
GAFA1Q96PS6 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC14.23□□□□□ -0.13
GAFA1Q96PS6 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
GAFA1Q96PS6 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC14.23□□□□□ -0.13
GAFA1Q96PS6 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
GAFA1Q96PS6 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
GAFA1Q96PS6 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
GAFA1Q96PS6 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
GAFA1Q96PS6 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
GAFA1Q96PS6 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC14.23□□□□□ -0.13
GAFA1Q96PS6 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC14.22□□□□□ -0.13
GAFA1Q96PS6 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
GAFA1Q96PS6 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
GAFA1Q96PS6 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
GAFA1Q96PS6 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC14.22□□□□□ -0.13
GAFA1Q96PS6 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
GAFA1Q96PS6 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
GAFA1Q96PS6 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC14.22□□□□□ -0.13
GAFA1Q96PS6 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC14.22□□□□□ -0.13
GAFA1Q96PS6 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC14.22□□□□□ -0.13
GAFA1Q96PS6 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC14.22□□□□□ -0.13
GAFA1Q96PS6 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
GAFA1Q96PS6 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
GAFA1Q96PS6 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
GAFA1Q96PS6 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
GAFA1Q96PS6 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
GAFA1Q96PS6 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
GAFA1Q96PS6 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
GAFA1Q96PS6 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC14.22□□□□□ -0.13
GAFA1Q96PS6 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC14.22□□□□□ -0.13
GAFA1Q96PS6 AC087163.2-201ENST00000457299 853 ntBASIC14.22□□□□□ -0.13
GAFA1Q96PS6 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC14.22□□□□□ -0.13
GAFA1Q96PS6 GGTLC5P-201ENST00000617623 998 ntBASIC14.22□□□□□ -0.13
GAFA1Q96PS6 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC14.22□□□□□ -0.13
GAFA1Q96PS6 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC14.22□□□□□ -0.13
GAFA1Q96PS6 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
GAFA1Q96PS6 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
GAFA1Q96PS6 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC14.22□□□□□ -0.13
GAFA1Q96PS6 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
GAFA1Q96PS6 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
GAFA1Q96PS6 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
GAFA1Q96PS6 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
GAFA1Q96PS6 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC14.22□□□□□ -0.13
GAFA1Q96PS6 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
GAFA1Q96PS6 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
GAFA1Q96PS6 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
GAFA1Q96PS6 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
GAFA1Q96PS6 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
GAFA1Q96PS6 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC14.21□□□□□ -0.13
GAFA1Q96PS6 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC14.21□□□□□ -0.13
GAFA1Q96PS6 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
GAFA1Q96PS6 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
GAFA1Q96PS6 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
GAFA1Q96PS6 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms