Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
COL21A1Q96P44 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
COL21A1Q96P44 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
COL21A1Q96P44 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
COL21A1Q96P44 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
COL21A1Q96P44 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC16.23■□□□□ 0.19
COL21A1Q96P44 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
COL21A1Q96P44 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
COL21A1Q96P44 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
COL21A1Q96P44 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
COL21A1Q96P44 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
COL21A1Q96P44 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC16.23■□□□□ 0.19
COL21A1Q96P44 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
COL21A1Q96P44 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
COL21A1Q96P44 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
COL21A1Q96P44 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
COL21A1Q96P44 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
COL21A1Q96P44 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC16.22■□□□□ 0.19
COL21A1Q96P44 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
COL21A1Q96P44 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC16.22■□□□□ 0.19
COL21A1Q96P44 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
COL21A1Q96P44 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
COL21A1Q96P44 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC16.22■□□□□ 0.19
COL21A1Q96P44 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC16.22■□□□□ 0.19
COL21A1Q96P44 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
COL21A1Q96P44 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
COL21A1Q96P44 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
COL21A1Q96P44 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC16.22■□□□□ 0.19
COL21A1Q96P44 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
COL21A1Q96P44 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
COL21A1Q96P44 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
COL21A1Q96P44 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC16.22■□□□□ 0.19
COL21A1Q96P44 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
COL21A1Q96P44 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
COL21A1Q96P44 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC16.22■□□□□ 0.19
COL21A1Q96P44 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC16.22■□□□□ 0.19
COL21A1Q96P44 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
COL21A1Q96P44 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
COL21A1Q96P44 MYCLP1-201ENST00000372451 1075 ntBASIC16.22■□□□□ 0.19
COL21A1Q96P44 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
COL21A1Q96P44 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC16.22■□□□□ 0.19
COL21A1Q96P44 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC16.22■□□□□ 0.19
COL21A1Q96P44 GZMM-202ENST00000592501 941 ntTSL 3 BASIC16.22■□□□□ 0.19
COL21A1Q96P44 AL732292.2-201ENST00000609649 430 ntBASIC16.22■□□□□ 0.19
COL21A1Q96P44 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
COL21A1Q96P44 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC16.22■□□□□ 0.19
COL21A1Q96P44 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
COL21A1Q96P44 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
COL21A1Q96P44 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
COL21A1Q96P44 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
COL21A1Q96P44 AGGF1P2-201ENST00000426656 2106 ntBASIC16.22■□□□□ 0.19
COL21A1Q96P44 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
COL21A1Q96P44 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
COL21A1Q96P44 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
COL21A1Q96P44 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
COL21A1Q96P44 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
COL21A1Q96P44 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
COL21A1Q96P44 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
COL21A1Q96P44 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
COL21A1Q96P44 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
COL21A1Q96P44 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
COL21A1Q96P44 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC16.21■□□□□ 0.19
COL21A1Q96P44 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
COL21A1Q96P44 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC16.21■□□□□ 0.19
COL21A1Q96P44 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
COL21A1Q96P44 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
COL21A1Q96P44 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC16.21■□□□□ 0.19
COL21A1Q96P44 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
COL21A1Q96P44 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
COL21A1Q96P44 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
COL21A1Q96P44 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
COL21A1Q96P44 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC16.21■□□□□ 0.19
COL21A1Q96P44 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
COL21A1Q96P44 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
COL21A1Q96P44 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
COL21A1Q96P44 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC16.21■□□□□ 0.19
COL21A1Q96P44 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
COL21A1Q96P44 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
COL21A1Q96P44 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
COL21A1Q96P44 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
COL21A1Q96P44 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC16.21■□□□□ 0.19
COL21A1Q96P44 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
COL21A1Q96P44 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
COL21A1Q96P44 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
COL21A1Q96P44 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
COL21A1Q96P44 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
COL21A1Q96P44 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
COL21A1Q96P44 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC16.21■□□□□ 0.19
COL21A1Q96P44 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
COL21A1Q96P44 DUSP5P1-201ENST00000441325 1139 ntBASIC16.21■□□□□ 0.19
COL21A1Q96P44 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC16.21■□□□□ 0.19
COL21A1Q96P44 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC16.21■□□□□ 0.19
COL21A1Q96P44 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC16.21■□□□□ 0.19
COL21A1Q96P44 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
COL21A1Q96P44 AC111152.3-201ENST00000569699 673 ntBASIC16.21■□□□□ 0.19
COL21A1Q96P44 TBCB-205ENST00000585746 875 ntTSL 3 BASIC16.21■□□□□ 0.19
COL21A1Q96P44 AC019129.2-201ENST00000609837 1235 ntBASIC16.21■□□□□ 0.19
COL21A1Q96P44 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC16.21■□□□□ 0.19
COL21A1Q96P44 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC16.21■□□□□ 0.19
COL21A1Q96P44 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms