Protein–RNA interactions for Protein: Q8N668

COMMD1, COMM domain-containing protein 1, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1Q8N668 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
COMMD1Q8N668 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
COMMD1Q8N668 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC14.29□□□□□ -0.12
COMMD1Q8N668 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
COMMD1Q8N668 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
COMMD1Q8N668 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
COMMD1Q8N668 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
COMMD1Q8N668 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
COMMD1Q8N668 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
COMMD1Q8N668 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
COMMD1Q8N668 IGHGP-201ENST00000390555 1178 ntBASIC14.29□□□□□ -0.12
COMMD1Q8N668 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
COMMD1Q8N668 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC14.29□□□□□ -0.12
COMMD1Q8N668 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC14.29□□□□□ -0.12
COMMD1Q8N668 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
COMMD1Q8N668 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC14.29□□□□□ -0.12
COMMD1Q8N668 GUSBP12-201ENST00000513727 720 ntBASIC14.29□□□□□ -0.12
COMMD1Q8N668 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC14.29□□□□□ -0.12
COMMD1Q8N668 ANKRD20A8P-203ENST00000641373 517 ntBASIC14.29□□□□□ -0.12
COMMD1Q8N668 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
COMMD1Q8N668 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
COMMD1Q8N668 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC14.29□□□□□ -0.12
COMMD1Q8N668 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC14.29□□□□□ -0.12
COMMD1Q8N668 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
COMMD1Q8N668 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
COMMD1Q8N668 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
COMMD1Q8N668 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
COMMD1Q8N668 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC14.29□□□□□ -0.12
COMMD1Q8N668 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
COMMD1Q8N668 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
COMMD1Q8N668 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
COMMD1Q8N668 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
COMMD1Q8N668 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
COMMD1Q8N668 BID-213ENST00000615414 2236 ntTSL 5 BASIC14.29□□□□□ -0.12
COMMD1Q8N668 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC14.29□□□□□ -0.12
COMMD1Q8N668 AC105917.1-201ENST00000506637 2539 ntBASIC14.29□□□□□ -0.12
COMMD1Q8N668 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
COMMD1Q8N668 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC14.28□□□□□ -0.12
COMMD1Q8N668 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
COMMD1Q8N668 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC14.28□□□□□ -0.12
COMMD1Q8N668 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC14.28□□□□□ -0.12
COMMD1Q8N668 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
COMMD1Q8N668 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
COMMD1Q8N668 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
COMMD1Q8N668 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
COMMD1Q8N668 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
COMMD1Q8N668 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
COMMD1Q8N668 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC14.28□□□□□ -0.12
COMMD1Q8N668 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
COMMD1Q8N668 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
COMMD1Q8N668 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC14.28□□□□□ -0.12
COMMD1Q8N668 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC14.28□□□□□ -0.12
COMMD1Q8N668 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC14.28□□□□□ -0.12
COMMD1Q8N668 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
COMMD1Q8N668 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC14.28□□□□□ -0.12
COMMD1Q8N668 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
COMMD1Q8N668 AC093010.1-201ENST00000473625 1624 ntBASIC14.28□□□□□ -0.12
COMMD1Q8N668 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC14.28□□□□□ -0.12
COMMD1Q8N668 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC14.28□□□□□ -0.12
COMMD1Q8N668 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
COMMD1Q8N668 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
COMMD1Q8N668 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC14.28□□□□□ -0.12
COMMD1Q8N668 NMU-205ENST00000511469 756 ntTSL 3 BASIC14.28□□□□□ -0.12
COMMD1Q8N668 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC14.28□□□□□ -0.12
COMMD1Q8N668 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC14.28□□□□□ -0.12
COMMD1Q8N668 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
COMMD1Q8N668 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC14.28□□□□□ -0.12
COMMD1Q8N668 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
COMMD1Q8N668 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
COMMD1Q8N668 AC005332.3-201ENST00000589904 676 ntBASIC14.28□□□□□ -0.12
COMMD1Q8N668 AL390719.2-201ENST00000606993 987 ntBASIC14.28□□□□□ -0.12
COMMD1Q8N668 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC14.28□□□□□ -0.12
COMMD1Q8N668 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC14.28□□□□□ -0.12
COMMD1Q8N668 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
COMMD1Q8N668 VPS72-207ENST00000640458 689 ntTSL 5 BASIC14.28□□□□□ -0.12
COMMD1Q8N668 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
COMMD1Q8N668 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
COMMD1Q8N668 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC14.28□□□□□ -0.12
COMMD1Q8N668 LINC00554-201ENST00000564841 3011 ntBASIC14.28□□□□□ -0.12
COMMD1Q8N668 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
COMMD1Q8N668 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC14.27□□□□□ -0.12
COMMD1Q8N668 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC14.27□□□□□ -0.12
COMMD1Q8N668 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
COMMD1Q8N668 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
COMMD1Q8N668 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC14.27□□□□□ -0.12
COMMD1Q8N668 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
COMMD1Q8N668 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
COMMD1Q8N668 HLA-J-201ENST00000462773 1622 ntBASIC14.27□□□□□ -0.12
COMMD1Q8N668 Z83836.1-201ENST00000624605 1642 ntBASIC14.27□□□□□ -0.12
COMMD1Q8N668 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
COMMD1Q8N668 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
COMMD1Q8N668 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
COMMD1Q8N668 AC016734.2-201ENST00000624325 1377 ntBASIC14.27□□□□□ -0.12
COMMD1Q8N668 AC092850.2-201ENST00000623821 2697 ntBASIC14.27□□□□□ -0.12
COMMD1Q8N668 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
COMMD1Q8N668 CA12-203ENST00000422263 2556 ntTSL 2 BASIC14.27□□□□□ -0.13
COMMD1Q8N668 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
COMMD1Q8N668 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
COMMD1Q8N668 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC14.27□□□□□ -0.13
COMMD1Q8N668 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms