Protein–RNA interactions for Protein: Q8IWF9

CCDC83, Coiled-coil domain-containing protein 83, humanhuman

Predictions only

Length 413 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC83Q8IWF9 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC20.15■□□□□ 0.82
CCDC83Q8IWF9 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
CCDC83Q8IWF9 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC20.15■□□□□ 0.82
CCDC83Q8IWF9 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CCDC83Q8IWF9 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CCDC83Q8IWF9 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
CCDC83Q8IWF9 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CCDC83Q8IWF9 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
CCDC83Q8IWF9 SPDYE21P-201ENST00000413323 827 ntBASIC20.15■□□□□ 0.82
CCDC83Q8IWF9 AL020989.1-201ENST00000422979 469 ntBASIC20.15■□□□□ 0.82
CCDC83Q8IWF9 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CCDC83Q8IWF9 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
CCDC83Q8IWF9 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC20.15■□□□□ 0.82
CCDC83Q8IWF9 AC012615.1-201ENST00000565797 1299 ntBASIC20.15■□□□□ 0.82
CCDC83Q8IWF9 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC20.15■□□□□ 0.82
CCDC83Q8IWF9 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CCDC83Q8IWF9 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CCDC83Q8IWF9 AC004817.3-201ENST00000602957 2129 ntBASIC20.15■□□□□ 0.82
CCDC83Q8IWF9 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CCDC83Q8IWF9 AC018695.7-201ENST00000624587 2492 ntBASIC20.15■□□□□ 0.82
CCDC83Q8IWF9 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
CCDC83Q8IWF9 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC20.15■□□□□ 0.82
CCDC83Q8IWF9 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CCDC83Q8IWF9 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
CCDC83Q8IWF9 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.82
CCDC83Q8IWF9 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
CCDC83Q8IWF9 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.82
CCDC83Q8IWF9 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
CCDC83Q8IWF9 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC20.14■□□□□ 0.81
CCDC83Q8IWF9 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CCDC83Q8IWF9 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CCDC83Q8IWF9 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CCDC83Q8IWF9 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CCDC83Q8IWF9 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CCDC83Q8IWF9 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC20.14■□□□□ 0.81
CCDC83Q8IWF9 POM121L3P-201ENST00000419331 1163 ntBASIC20.14■□□□□ 0.81
CCDC83Q8IWF9 SIGLEC30P-201ENST00000455569 941 ntBASIC20.14■□□□□ 0.81
CCDC83Q8IWF9 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC20.14■□□□□ 0.81
CCDC83Q8IWF9 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
CCDC83Q8IWF9 RMI2-205ENST00000576027 818 ntTSL 2 BASIC20.14■□□□□ 0.81
CCDC83Q8IWF9 CCNC-219ENST00000627680 896 ntTSL 5 BASIC20.14■□□□□ 0.81
CCDC83Q8IWF9 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC20.14■□□□□ 0.81
CCDC83Q8IWF9 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
CCDC83Q8IWF9 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
CCDC83Q8IWF9 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CCDC83Q8IWF9 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC20.13■□□□□ 0.81
CCDC83Q8IWF9 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CCDC83Q8IWF9 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
CCDC83Q8IWF9 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC20.13■□□□□ 0.81
CCDC83Q8IWF9 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
CCDC83Q8IWF9 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC20.13■□□□□ 0.81
CCDC83Q8IWF9 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
CCDC83Q8IWF9 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CCDC83Q8IWF9 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CCDC83Q8IWF9 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CCDC83Q8IWF9 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CCDC83Q8IWF9 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC20.13■□□□□ 0.81
CCDC83Q8IWF9 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CCDC83Q8IWF9 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC20.13■□□□□ 0.81
CCDC83Q8IWF9 ATP5G2P1-201ENST00000433580 426 ntBASIC20.13■□□□□ 0.81
CCDC83Q8IWF9 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CCDC83Q8IWF9 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC20.13■□□□□ 0.81
CCDC83Q8IWF9 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC20.13■□□□□ 0.81
CCDC83Q8IWF9 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CCDC83Q8IWF9 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CCDC83Q8IWF9 MIR5100-201ENST00000579544 119 ntBASIC20.13■□□□□ 0.81
CCDC83Q8IWF9 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
CCDC83Q8IWF9 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CCDC83Q8IWF9 AL445228.2-201ENST00000605589 952 ntBASIC20.13■□□□□ 0.81
CCDC83Q8IWF9 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CCDC83Q8IWF9 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC20.13■□□□□ 0.81
CCDC83Q8IWF9 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC20.13■□□□□ 0.81
CCDC83Q8IWF9 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC20.13■□□□□ 0.81
CCDC83Q8IWF9 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC20.13■□□□□ 0.81
CCDC83Q8IWF9 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
CCDC83Q8IWF9 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
CCDC83Q8IWF9 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CCDC83Q8IWF9 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CCDC83Q8IWF9 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
CCDC83Q8IWF9 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC20.12■□□□□ 0.81
CCDC83Q8IWF9 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC20.12■□□□□ 0.81
CCDC83Q8IWF9 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CCDC83Q8IWF9 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CCDC83Q8IWF9 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
CCDC83Q8IWF9 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC20.12■□□□□ 0.81
CCDC83Q8IWF9 AC097637.2-201ENST00000624096 1997 ntBASIC20.12■□□□□ 0.81
CCDC83Q8IWF9 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
CCDC83Q8IWF9 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
CCDC83Q8IWF9 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
CCDC83Q8IWF9 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CCDC83Q8IWF9 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC20.12■□□□□ 0.81
CCDC83Q8IWF9 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC20.12■□□□□ 0.81
CCDC83Q8IWF9 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CCDC83Q8IWF9 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC20.12■□□□□ 0.81
CCDC83Q8IWF9 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC20.12■□□□□ 0.81
CCDC83Q8IWF9 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC20.12■□□□□ 0.81
CCDC83Q8IWF9 SRP19-202ENST00000445150 833 ntTSL 2 BASIC20.12■□□□□ 0.81
CCDC83Q8IWF9 PNN-202ENST00000553331 656 ntTSL 3 BASIC20.12■□□□□ 0.81
CCDC83Q8IWF9 GZMM-202ENST00000592501 941 ntTSL 3 BASIC20.12■□□□□ 0.81
CCDC83Q8IWF9 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms