Protein–RNA interactions for Protein: Q86UE6

LRRTM1, Leucine-rich repeat transmembrane neuronal protein 1, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1Q86UE6 STK25P1-201ENST00000585406 838 ntBASIC14.92□□□□□ -0.02
LRRTM1Q86UE6 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC14.92□□□□□ -0.02
LRRTM1Q86UE6 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC14.92□□□□□ -0.02
LRRTM1Q86UE6 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LRRTM1Q86UE6 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
LRRTM1Q86UE6 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LRRTM1Q86UE6 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC14.92□□□□□ -0.02
LRRTM1Q86UE6 AC092364.2-201ENST00000596710 2692 ntBASIC14.92□□□□□ -0.02
LRRTM1Q86UE6 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC14.92□□□□□ -0.02
LRRTM1Q86UE6 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC14.92□□□□□ -0.02
LRRTM1Q86UE6 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
LRRTM1Q86UE6 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC14.92□□□□□ -0.02
LRRTM1Q86UE6 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC14.92□□□□□ -0.02
LRRTM1Q86UE6 PGR-209ENST00000617858 2816 ntTSL 5 BASIC14.92□□□□□ -0.02
LRRTM1Q86UE6 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC14.92□□□□□ -0.02
LRRTM1Q86UE6 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC14.92□□□□□ -0.02
LRRTM1Q86UE6 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LRRTM1Q86UE6 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LRRTM1Q86UE6 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
LRRTM1Q86UE6 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
LRRTM1Q86UE6 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC14.92□□□□□ -0.02
LRRTM1Q86UE6 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC14.92□□□□□ -0.02
LRRTM1Q86UE6 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LRRTM1Q86UE6 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
LRRTM1Q86UE6 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
LRRTM1Q86UE6 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC14.91□□□□□ -0.02
LRRTM1Q86UE6 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC14.91□□□□□ -0.02
LRRTM1Q86UE6 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
LRRTM1Q86UE6 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC14.91□□□□□ -0.02
LRRTM1Q86UE6 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
LRRTM1Q86UE6 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
LRRTM1Q86UE6 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC14.91□□□□□ -0.02
LRRTM1Q86UE6 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
LRRTM1Q86UE6 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC14.91□□□□□ -0.02
LRRTM1Q86UE6 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
LRRTM1Q86UE6 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
LRRTM1Q86UE6 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC14.91□□□□□ -0.02
LRRTM1Q86UE6 AL135999.2-201ENST00000622438 1686 ntBASIC14.91□□□□□ -0.02
LRRTM1Q86UE6 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC14.91□□□□□ -0.02
LRRTM1Q86UE6 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC14.91□□□□□ -0.02
LRRTM1Q86UE6 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LRRTM1Q86UE6 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LRRTM1Q86UE6 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LRRTM1Q86UE6 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
LRRTM1Q86UE6 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC14.91□□□□□ -0.02
LRRTM1Q86UE6 SLC25A3P1-201ENST00000443844 931 ntBASIC14.91□□□□□ -0.02
LRRTM1Q86UE6 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
LRRTM1Q86UE6 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC14.91□□□□□ -0.02
LRRTM1Q86UE6 DUT-205ENST00000558813 769 ntTSL 2 BASIC14.91□□□□□ -0.02
LRRTM1Q86UE6 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC14.91□□□□□ -0.02
LRRTM1Q86UE6 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LRRTM1Q86UE6 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC14.91□□□□□ -0.02
LRRTM1Q86UE6 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
LRRTM1Q86UE6 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC14.91□□□□□ -0.02
LRRTM1Q86UE6 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LRRTM1Q86UE6 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
LRRTM1Q86UE6 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC14.91□□□□□ -0.02
LRRTM1Q86UE6 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC14.91□□□□□ -0.02
LRRTM1Q86UE6 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC14.91□□□□□ -0.02
LRRTM1Q86UE6 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LRRTM1Q86UE6 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
LRRTM1Q86UE6 KRT8P10-201ENST00000450021 1447 ntBASIC14.91□□□□□ -0.02
LRRTM1Q86UE6 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
LRRTM1Q86UE6 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC14.91□□□□□ -0.02
LRRTM1Q86UE6 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC14.91□□□□□ -0.02
LRRTM1Q86UE6 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC14.91□□□□□ -0.02
LRRTM1Q86UE6 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
LRRTM1Q86UE6 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
LRRTM1Q86UE6 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LRRTM1Q86UE6 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
LRRTM1Q86UE6 AL645728.1-201ENST00000366221 2101 ntBASIC14.9□□□□□ -0.02
LRRTM1Q86UE6 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
LRRTM1Q86UE6 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC14.9□□□□□ -0.02
LRRTM1Q86UE6 GPR89P-201ENST00000407924 1495 ntBASIC14.9□□□□□ -0.02
LRRTM1Q86UE6 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
LRRTM1Q86UE6 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LRRTM1Q86UE6 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC14.9□□□□□ -0.02
LRRTM1Q86UE6 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LRRTM1Q86UE6 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LRRTM1Q86UE6 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
LRRTM1Q86UE6 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
LRRTM1Q86UE6 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LRRTM1Q86UE6 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
LRRTM1Q86UE6 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LRRTM1Q86UE6 COPE-203ENST00000351079 907 ntTSL 2 BASIC14.9□□□□□ -0.02
LRRTM1Q86UE6 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LRRTM1Q86UE6 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC14.9□□□□□ -0.02
LRRTM1Q86UE6 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
LRRTM1Q86UE6 SNX5-210ENST00000481323 562 ntTSL 3 BASIC14.9□□□□□ -0.02
LRRTM1Q86UE6 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC14.9□□□□□ -0.02
LRRTM1Q86UE6 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC14.9□□□□□ -0.02
LRRTM1Q86UE6 AC111152.3-201ENST00000569699 673 ntBASIC14.9□□□□□ -0.02
LRRTM1Q86UE6 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC14.9□□□□□ -0.02
LRRTM1Q86UE6 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC14.9□□□□□ -0.02
LRRTM1Q86UE6 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC14.9□□□□□ -0.02
LRRTM1Q86UE6 AC011558.1-201ENST00000623459 338 ntBASIC14.9□□□□□ -0.02
LRRTM1Q86UE6 AP006294.2-201ENST00000641667 209 ntBASIC14.9□□□□□ -0.02
LRRTM1Q86UE6 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
LRRTM1Q86UE6 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
LRRTM1Q86UE6 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms