Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
ZNF549Q6P9A3 GID4-202ENST00000376345 1391 ntTSL 3 BASIC17.02■□□□□ 0.31
ZNF549Q6P9A3 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC17.01■□□□□ 0.31
ZNF549Q6P9A3 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
ZNF549Q6P9A3 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
ZNF549Q6P9A3 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
ZNF549Q6P9A3 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
ZNF549Q6P9A3 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC17.01■□□□□ 0.31
ZNF549Q6P9A3 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
ZNF549Q6P9A3 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ZNF549Q6P9A3 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ZNF549Q6P9A3 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ZNF549Q6P9A3 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
ZNF549Q6P9A3 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ZNF549Q6P9A3 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ZNF549Q6P9A3 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC17.01■□□□□ 0.31
ZNF549Q6P9A3 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC17.01■□□□□ 0.31
ZNF549Q6P9A3 PRYP5-201ENST00000451909 266 ntBASIC17.01■□□□□ 0.31
ZNF549Q6P9A3 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ZNF549Q6P9A3 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
ZNF549Q6P9A3 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC17.01■□□□□ 0.31
ZNF549Q6P9A3 TBCB-205ENST00000585746 875 ntTSL 3 BASIC17.01■□□□□ 0.31
ZNF549Q6P9A3 NKAPP1-205ENST00000585790 367 ntBASIC17.01■□□□□ 0.31
ZNF549Q6P9A3 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC17.01■□□□□ 0.31
ZNF549Q6P9A3 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
ZNF549Q6P9A3 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ZNF549Q6P9A3 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ZNF549Q6P9A3 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC17.01■□□□□ 0.31
ZNF549Q6P9A3 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC17.01■□□□□ 0.31
ZNF549Q6P9A3 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC17.01■□□□□ 0.31
ZNF549Q6P9A3 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
ZNF549Q6P9A3 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
ZNF549Q6P9A3 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ZNF549Q6P9A3 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ZNF549Q6P9A3 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC17.01■□□□□ 0.31
ZNF549Q6P9A3 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC17.01■□□□□ 0.31
ZNF549Q6P9A3 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
ZNF549Q6P9A3 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ZNF549Q6P9A3 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
ZNF549Q6P9A3 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC17■□□□□ 0.31
ZNF549Q6P9A3 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC17■□□□□ 0.31
ZNF549Q6P9A3 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC17■□□□□ 0.31
ZNF549Q6P9A3 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ZNF549Q6P9A3 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC17■□□□□ 0.31
ZNF549Q6P9A3 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC17■□□□□ 0.31
ZNF549Q6P9A3 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
ZNF549Q6P9A3 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
ZNF549Q6P9A3 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
ZNF549Q6P9A3 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC17■□□□□ 0.31
ZNF549Q6P9A3 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
ZNF549Q6P9A3 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
ZNF549Q6P9A3 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC17■□□□□ 0.31
ZNF549Q6P9A3 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC17■□□□□ 0.31
ZNF549Q6P9A3 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC17■□□□□ 0.31
ZNF549Q6P9A3 DUX4L17-201ENST00000557360 1267 ntBASIC17■□□□□ 0.31
ZNF549Q6P9A3 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC17■□□□□ 0.31
ZNF549Q6P9A3 COX5A-202ENST00000562233 441 ntTSL 3 BASIC17■□□□□ 0.31
ZNF549Q6P9A3 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC17■□□□□ 0.31
ZNF549Q6P9A3 AC064862.7-201ENST00000604520 867 ntBASIC17■□□□□ 0.31
ZNF549Q6P9A3 AL121772.3-201ENST00000610840 674 ntBASIC17■□□□□ 0.31
ZNF549Q6P9A3 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
ZNF549Q6P9A3 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC17■□□□□ 0.31
ZNF549Q6P9A3 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC17■□□□□ 0.31
ZNF549Q6P9A3 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC17■□□□□ 0.31
ZNF549Q6P9A3 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC17■□□□□ 0.31
ZNF549Q6P9A3 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC17■□□□□ 0.31
ZNF549Q6P9A3 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC17■□□□□ 0.31
ZNF549Q6P9A3 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
ZNF549Q6P9A3 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
ZNF549Q6P9A3 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
ZNF549Q6P9A3 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
ZNF549Q6P9A3 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
ZNF549Q6P9A3 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
ZNF549Q6P9A3 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
ZNF549Q6P9A3 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
ZNF549Q6P9A3 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
ZNF549Q6P9A3 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
ZNF549Q6P9A3 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC16.99■□□□□ 0.31
ZNF549Q6P9A3 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
ZNF549Q6P9A3 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
ZNF549Q6P9A3 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
ZNF549Q6P9A3 RBM17P3-201ENST00000417687 1192 ntBASIC16.99■□□□□ 0.31
ZNF549Q6P9A3 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC16.99■□□□□ 0.31
ZNF549Q6P9A3 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
ZNF549Q6P9A3 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC16.99■□□□□ 0.31
ZNF549Q6P9A3 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC16.99■□□□□ 0.31
ZNF549Q6P9A3 PRR29-207ENST00000580752 458 ntTSL 3 BASIC16.99■□□□□ 0.31
ZNF549Q6P9A3 MTDHP3-201ENST00000594186 672 ntBASIC16.99■□□□□ 0.31
ZNF549Q6P9A3 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC16.99■□□□□ 0.31
ZNF549Q6P9A3 AC012313.10-201ENST00000623509 926 ntBASIC16.99■□□□□ 0.31
ZNF549Q6P9A3 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC16.99■□□□□ 0.31
ZNF549Q6P9A3 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
ZNF549Q6P9A3 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
ZNF549Q6P9A3 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
ZNF549Q6P9A3 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
ZNF549Q6P9A3 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC16.99■□□□□ 0.31
ZNF549Q6P9A3 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
ZNF549Q6P9A3 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC16.99■□□□□ 0.31
ZNF549Q6P9A3 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC16.99■□□□□ 0.31
ZNF549Q6P9A3 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 59.8 ms