Protein–RNA interactions for Protein: Q5VT98

PRAMEF20, PRAME family member 20, humanhuman

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF20Q5VT98 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PRAMEF20Q5VT98 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC15.69■□□□□ 0.1
PRAMEF20Q5VT98 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PRAMEF20Q5VT98 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
PRAMEF20Q5VT98 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
PRAMEF20Q5VT98 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
PRAMEF20Q5VT98 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PRAMEF20Q5VT98 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PRAMEF20Q5VT98 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
PRAMEF20Q5VT98 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PRAMEF20Q5VT98 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PRAMEF20Q5VT98 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC15.68■□□□□ 0.1
PRAMEF20Q5VT98 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
PRAMEF20Q5VT98 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC15.68■□□□□ 0.1
PRAMEF20Q5VT98 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
PRAMEF20Q5VT98 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
PRAMEF20Q5VT98 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PRAMEF20Q5VT98 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PRAMEF20Q5VT98 AC141586.5-201ENST00000624546 2050 ntBASIC15.68■□□□□ 0.1
PRAMEF20Q5VT98 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PRAMEF20Q5VT98 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
PRAMEF20Q5VT98 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC15.68■□□□□ 0.1
PRAMEF20Q5VT98 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PRAMEF20Q5VT98 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PRAMEF20Q5VT98 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
PRAMEF20Q5VT98 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PRAMEF20Q5VT98 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
PRAMEF20Q5VT98 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC15.68■□□□□ 0.1
PRAMEF20Q5VT98 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
PRAMEF20Q5VT98 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC15.68■□□□□ 0.1
PRAMEF20Q5VT98 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
PRAMEF20Q5VT98 VN2R19P-201ENST00000442399 1052 ntBASIC15.68■□□□□ 0.1
PRAMEF20Q5VT98 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC15.68■□□□□ 0.1
PRAMEF20Q5VT98 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC15.68■□□□□ 0.1
PRAMEF20Q5VT98 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC15.68■□□□□ 0.1
PRAMEF20Q5VT98 AC018845.2-201ENST00000568326 409 ntBASIC15.68■□□□□ 0.1
PRAMEF20Q5VT98 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
PRAMEF20Q5VT98 CYB561-216ENST00000582297 897 ntTSL 3 BASIC15.68■□□□□ 0.1
PRAMEF20Q5VT98 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC15.68■□□□□ 0.1
PRAMEF20Q5VT98 AC010654.1-201ENST00000615722 808 ntBASIC15.68■□□□□ 0.1
PRAMEF20Q5VT98 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
PRAMEF20Q5VT98 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PRAMEF20Q5VT98 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
PRAMEF20Q5VT98 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC15.68■□□□□ 0.1
PRAMEF20Q5VT98 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PRAMEF20Q5VT98 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC15.68■□□□□ 0.1
PRAMEF20Q5VT98 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PRAMEF20Q5VT98 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PRAMEF20Q5VT98 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
PRAMEF20Q5VT98 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PRAMEF20Q5VT98 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PRAMEF20Q5VT98 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PRAMEF20Q5VT98 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PRAMEF20Q5VT98 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
PRAMEF20Q5VT98 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PRAMEF20Q5VT98 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC15.67■□□□□ 0.1
PRAMEF20Q5VT98 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
PRAMEF20Q5VT98 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
PRAMEF20Q5VT98 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC15.67■□□□□ 0.1
PRAMEF20Q5VT98 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC15.67■□□□□ 0.1
PRAMEF20Q5VT98 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PRAMEF20Q5VT98 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PRAMEF20Q5VT98 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC15.67■□□□□ 0.1
PRAMEF20Q5VT98 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
PRAMEF20Q5VT98 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PRAMEF20Q5VT98 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PRAMEF20Q5VT98 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PRAMEF20Q5VT98 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PRAMEF20Q5VT98 KRT18P2-201ENST00000447938 1258 ntBASIC15.67■□□□□ 0.1
PRAMEF20Q5VT98 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC15.67■□□□□ 0.1
PRAMEF20Q5VT98 NMU-202ENST00000505262 693 ntTSL 3 BASIC15.67■□□□□ 0.1
PRAMEF20Q5VT98 PGAM5P1-201ENST00000518923 814 ntBASIC15.67■□□□□ 0.1
PRAMEF20Q5VT98 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC15.67■□□□□ 0.1
PRAMEF20Q5VT98 AC092865.5-201ENST00000545435 363 ntBASIC15.67■□□□□ 0.1
PRAMEF20Q5VT98 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PRAMEF20Q5VT98 CIPC-205ENST00000555437 566 ntTSL 3 BASIC15.67■□□□□ 0.1
PRAMEF20Q5VT98 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC15.67■□□□□ 0.1
PRAMEF20Q5VT98 AC023511.2-201ENST00000618803 211 ntBASIC15.67■□□□□ 0.1
PRAMEF20Q5VT98 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
PRAMEF20Q5VT98 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
PRAMEF20Q5VT98 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PRAMEF20Q5VT98 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC15.67■□□□□ 0.1
PRAMEF20Q5VT98 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PRAMEF20Q5VT98 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PRAMEF20Q5VT98 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PRAMEF20Q5VT98 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PRAMEF20Q5VT98 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PRAMEF20Q5VT98 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
PRAMEF20Q5VT98 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC15.67■□□□□ 0.1
PRAMEF20Q5VT98 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PRAMEF20Q5VT98 HNRNPRP1-201ENST00000453465 1695 ntBASIC15.67■□□□□ 0.1
PRAMEF20Q5VT98 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
PRAMEF20Q5VT98 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC15.66■□□□□ 0.1
PRAMEF20Q5VT98 EGFEM1P-202ENST00000431685 1563 ntBASIC15.66■□□□□ 0.1
PRAMEF20Q5VT98 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PRAMEF20Q5VT98 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PRAMEF20Q5VT98 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
PRAMEF20Q5VT98 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC15.66■□□□□ 0.1
PRAMEF20Q5VT98 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC15.66■□□□□ 0.1
PRAMEF20Q5VT98 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms