Protein–RNA interactions for Protein: Q5SW96

LDLRAP1, Low density lipoprotein receptor adapter protein 1, humanhuman

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAP1Q5SW96 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LDLRAP1Q5SW96 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
LDLRAP1Q5SW96 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC17.09■□□□□ 0.33
LDLRAP1Q5SW96 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
LDLRAP1Q5SW96 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC17.09■□□□□ 0.33
LDLRAP1Q5SW96 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC17.09■□□□□ 0.33
LDLRAP1Q5SW96 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC17.09■□□□□ 0.33
LDLRAP1Q5SW96 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC17.09■□□□□ 0.33
LDLRAP1Q5SW96 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC17.09■□□□□ 0.33
LDLRAP1Q5SW96 FAM215A-202ENST00000632077 792 ntBASIC17.09■□□□□ 0.33
LDLRAP1Q5SW96 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC17.09■□□□□ 0.33
LDLRAP1Q5SW96 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC17.09■□□□□ 0.33
LDLRAP1Q5SW96 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
LDLRAP1Q5SW96 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
LDLRAP1Q5SW96 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC17.09■□□□□ 0.33
LDLRAP1Q5SW96 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC17.08■□□□□ 0.33
LDLRAP1Q5SW96 AC046158.3-201ENST00000624947 2558 ntBASIC17.08■□□□□ 0.33
LDLRAP1Q5SW96 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC17.08■□□□□ 0.33
LDLRAP1Q5SW96 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
LDLRAP1Q5SW96 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
LDLRAP1Q5SW96 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC17.08■□□□□ 0.33
LDLRAP1Q5SW96 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC17.08■□□□□ 0.33
LDLRAP1Q5SW96 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
LDLRAP1Q5SW96 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC17.08■□□□□ 0.33
LDLRAP1Q5SW96 AC093525.9-201ENST00000624961 1746 ntBASIC17.08■□□□□ 0.32
LDLRAP1Q5SW96 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
LDLRAP1Q5SW96 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC17.08■□□□□ 0.32
LDLRAP1Q5SW96 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC17.08■□□□□ 0.32
LDLRAP1Q5SW96 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC17.08■□□□□ 0.32
LDLRAP1Q5SW96 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
LDLRAP1Q5SW96 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
LDLRAP1Q5SW96 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC17.08■□□□□ 0.32
LDLRAP1Q5SW96 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
LDLRAP1Q5SW96 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC17.08■□□□□ 0.32
LDLRAP1Q5SW96 FDX1P1-201ENST00000449115 551 ntBASIC17.08■□□□□ 0.32
LDLRAP1Q5SW96 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
LDLRAP1Q5SW96 AC105339.3-201ENST00000560043 636 ntBASIC17.08■□□□□ 0.32
LDLRAP1Q5SW96 PRKN-208ENST00000610470 531 ntTSL 2 BASIC17.08■□□□□ 0.32
LDLRAP1Q5SW96 PRKN-209ENST00000612485 225 ntTSL 5 BASIC17.08■□□□□ 0.32
LDLRAP1Q5SW96 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC17.08■□□□□ 0.32
LDLRAP1Q5SW96 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
LDLRAP1Q5SW96 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
LDLRAP1Q5SW96 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
LDLRAP1Q5SW96 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
LDLRAP1Q5SW96 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
LDLRAP1Q5SW96 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
LDLRAP1Q5SW96 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
LDLRAP1Q5SW96 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC17.08■□□□□ 0.32
LDLRAP1Q5SW96 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
LDLRAP1Q5SW96 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
LDLRAP1Q5SW96 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
LDLRAP1Q5SW96 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
LDLRAP1Q5SW96 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LDLRAP1Q5SW96 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
LDLRAP1Q5SW96 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC17.07■□□□□ 0.32
LDLRAP1Q5SW96 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC17.07■□□□□ 0.32
LDLRAP1Q5SW96 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC17.07■□□□□ 0.32
LDLRAP1Q5SW96 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LDLRAP1Q5SW96 GPR89P-201ENST00000407924 1495 ntBASIC17.07■□□□□ 0.32
LDLRAP1Q5SW96 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
LDLRAP1Q5SW96 PP12613-201ENST00000424958 2230 ntBASIC17.07■□□□□ 0.32
LDLRAP1Q5SW96 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
LDLRAP1Q5SW96 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC17.07■□□□□ 0.32
LDLRAP1Q5SW96 HLA-A-201ENST00000376802 1334 ntBASIC17.07■□□□□ 0.32
LDLRAP1Q5SW96 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LDLRAP1Q5SW96 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
LDLRAP1Q5SW96 NABP1-203ENST00000409510 843 ntTSL 5 BASIC17.07■□□□□ 0.32
LDLRAP1Q5SW96 KRT18P27-201ENST00000427733 1299 ntBASIC17.07■□□□□ 0.32
LDLRAP1Q5SW96 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC17.07■□□□□ 0.32
LDLRAP1Q5SW96 RNA5SP419-201ENST00000515908 135 ntBASIC17.07■□□□□ 0.32
LDLRAP1Q5SW96 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC17.07■□□□□ 0.32
LDLRAP1Q5SW96 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC17.07■□□□□ 0.32
LDLRAP1Q5SW96 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
LDLRAP1Q5SW96 CYGB-205ENST00000590175 830 ntTSL 3 BASIC17.07■□□□□ 0.32
LDLRAP1Q5SW96 MIR1199-201ENST00000621445 119 ntBASIC17.07■□□□□ 0.32
LDLRAP1Q5SW96 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LDLRAP1Q5SW96 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
LDLRAP1Q5SW96 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC17.07■□□□□ 0.32
LDLRAP1Q5SW96 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LDLRAP1Q5SW96 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
LDLRAP1Q5SW96 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LDLRAP1Q5SW96 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LDLRAP1Q5SW96 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC17.07■□□□□ 0.32
LDLRAP1Q5SW96 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
LDLRAP1Q5SW96 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LDLRAP1Q5SW96 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
LDLRAP1Q5SW96 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
LDLRAP1Q5SW96 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC17.06■□□□□ 0.32
LDLRAP1Q5SW96 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LDLRAP1Q5SW96 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LDLRAP1Q5SW96 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
LDLRAP1Q5SW96 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LDLRAP1Q5SW96 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LDLRAP1Q5SW96 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
LDLRAP1Q5SW96 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
LDLRAP1Q5SW96 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
LDLRAP1Q5SW96 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
LDLRAP1Q5SW96 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
LDLRAP1Q5SW96 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC17.06■□□□□ 0.32
LDLRAP1Q5SW96 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms