Protein–RNA interactions for Protein: Q495M9

USH1G, Usher syndrome type-1G protein, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1GQ495M9 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
USH1GQ495M9 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC19.61■□□□□ 0.73
USH1GQ495M9 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
USH1GQ495M9 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC19.61■□□□□ 0.73
USH1GQ495M9 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
USH1GQ495M9 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
USH1GQ495M9 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC19.61■□□□□ 0.73
USH1GQ495M9 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC19.61■□□□□ 0.73
USH1GQ495M9 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC19.61■□□□□ 0.73
USH1GQ495M9 AC211486.1-202ENST00000416371 468 ntBASIC19.61■□□□□ 0.73
USH1GQ495M9 HTR5BP-201ENST00000430851 1154 ntBASIC19.61■□□□□ 0.73
USH1GQ495M9 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
USH1GQ495M9 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC19.61■□□□□ 0.73
USH1GQ495M9 AC211476.1-201ENST00000503899 468 ntBASIC19.61■□□□□ 0.73
USH1GQ495M9 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC19.61■□□□□ 0.73
USH1GQ495M9 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
USH1GQ495M9 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
USH1GQ495M9 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
USH1GQ495M9 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC19.61■□□□□ 0.73
USH1GQ495M9 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
USH1GQ495M9 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC19.61■□□□□ 0.73
USH1GQ495M9 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
USH1GQ495M9 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC19.61■□□□□ 0.73
USH1GQ495M9 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
USH1GQ495M9 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC19.61■□□□□ 0.73
USH1GQ495M9 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
USH1GQ495M9 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
USH1GQ495M9 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
USH1GQ495M9 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
USH1GQ495M9 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
USH1GQ495M9 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
USH1GQ495M9 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
USH1GQ495M9 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
USH1GQ495M9 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
USH1GQ495M9 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
USH1GQ495M9 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
USH1GQ495M9 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
USH1GQ495M9 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
USH1GQ495M9 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
USH1GQ495M9 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC19.6■□□□□ 0.73
USH1GQ495M9 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC19.6■□□□□ 0.73
USH1GQ495M9 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC19.6■□□□□ 0.73
USH1GQ495M9 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC19.6■□□□□ 0.73
USH1GQ495M9 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC19.6■□□□□ 0.73
USH1GQ495M9 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
USH1GQ495M9 AC092919.2-201ENST00000623631 1645 ntBASIC19.6■□□□□ 0.73
USH1GQ495M9 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
USH1GQ495M9 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
USH1GQ495M9 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC19.6■□□□□ 0.73
USH1GQ495M9 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
USH1GQ495M9 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
USH1GQ495M9 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC19.6■□□□□ 0.73
USH1GQ495M9 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
USH1GQ495M9 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
USH1GQ495M9 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC19.59■□□□□ 0.73
USH1GQ495M9 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC19.59■□□□□ 0.73
USH1GQ495M9 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
USH1GQ495M9 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
USH1GQ495M9 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
USH1GQ495M9 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC19.59■□□□□ 0.73
USH1GQ495M9 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC19.59■□□□□ 0.73
USH1GQ495M9 AC026471.1-201ENST00000564629 3026 ntBASIC19.59■□□□□ 0.73
USH1GQ495M9 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC19.59■□□□□ 0.73
USH1GQ495M9 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
USH1GQ495M9 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC19.59■□□□□ 0.73
USH1GQ495M9 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
USH1GQ495M9 DDT-204ENST00000404092 805 ntTSL 3 BASIC19.59■□□□□ 0.73
USH1GQ495M9 FAM58CP-201ENST00000435741 640 ntBASIC19.59■□□□□ 0.73
USH1GQ495M9 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC19.59■□□□□ 0.73
USH1GQ495M9 AC092183.1-201ENST00000469884 875 ntBASIC19.59■□□□□ 0.73
USH1GQ495M9 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC19.59■□□□□ 0.73
USH1GQ495M9 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
USH1GQ495M9 MED16-214ENST00000617672 554 ntTSL 5 BASIC19.59■□□□□ 0.73
USH1GQ495M9 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
USH1GQ495M9 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
USH1GQ495M9 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
USH1GQ495M9 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
USH1GQ495M9 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
USH1GQ495M9 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
USH1GQ495M9 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
USH1GQ495M9 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC19.59■□□□□ 0.73
USH1GQ495M9 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
USH1GQ495M9 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
USH1GQ495M9 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
USH1GQ495M9 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
USH1GQ495M9 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC19.58■□□□□ 0.73
USH1GQ495M9 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC19.58■□□□□ 0.72
USH1GQ495M9 DNAJB3-202ENST00000449667 1266 ntBASIC19.58■□□□□ 0.72
USH1GQ495M9 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC19.58■□□□□ 0.72
USH1GQ495M9 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC19.58■□□□□ 0.72
USH1GQ495M9 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC19.58■□□□□ 0.72
USH1GQ495M9 AL596442.2-201ENST00000610240 980 ntBASIC19.58■□□□□ 0.72
USH1GQ495M9 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
USH1GQ495M9 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
USH1GQ495M9 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC19.58■□□□□ 0.72
USH1GQ495M9 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC19.58■□□□□ 0.72
USH1GQ495M9 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
USH1GQ495M9 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC19.58■□□□□ 0.72
USH1GQ495M9 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC19.58■□□□□ 0.72
USH1GQ495M9 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms