Protein–RNA interactions for Protein: P52738

ZNF140, Zinc finger protein 140, humanhuman

Predicted RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF140P52738 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
ZNF140P52738 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
ZNF140P52738 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
ZNF140P52738 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
ZNF140P52738 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC17.02■□□□□ 0.32
ZNF140P52738 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC17.02■□□□□ 0.32
ZNF140P52738 CENPM-204ENST00000402420 688 ntTSL 5 BASIC17.02■□□□□ 0.32
ZNF140P52738 AL031284.1-201ENST00000419297 478 ntBASIC17.02■□□□□ 0.32
ZNF140P52738 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC17.02■□□□□ 0.32
ZNF140P52738 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC17.02■□□□□ 0.32
ZNF140P52738 AL049840.3-201ENST00000602669 611 ntBASIC17.02■□□□□ 0.32
ZNF140P52738 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
ZNF140P52738 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC17.02■□□□□ 0.32
ZNF140P52738 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
ZNF140P52738 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
ZNF140P52738 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
ZNF140P52738 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
ZNF140P52738 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC17.02■□□□□ 0.31
ZNF140P52738 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
ZNF140P52738 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
ZNF140P52738 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
ZNF140P52738 AC078925.2-201ENST00000624013 1973 ntBASIC17.02■□□□□ 0.31
ZNF140P52738 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC17.02■□□□□ 0.31
ZNF140P52738 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
ZNF140P52738 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
ZNF140P52738 AGGF1P2-201ENST00000426656 2106 ntBASIC17.02■□□□□ 0.31
ZNF140P52738 AL021920.2-201ENST00000624828 1351 ntBASIC17.02■□□□□ 0.31
ZNF140P52738 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
ZNF140P52738 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ZNF140P52738 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
ZNF140P52738 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC17.01■□□□□ 0.31
ZNF140P52738 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
ZNF140P52738 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC17.01■□□□□ 0.31
ZNF140P52738 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC17.01■□□□□ 0.31
ZNF140P52738 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ZNF140P52738 RPS2P28-201ENST00000314255 741 ntBASIC17.01■□□□□ 0.31
ZNF140P52738 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC17.01■□□□□ 0.31
ZNF140P52738 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC17.01■□□□□ 0.31
ZNF140P52738 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ZNF140P52738 AC009078.2-202ENST00000463353 338 ntBASIC17.01■□□□□ 0.31
ZNF140P52738 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC17.01■□□□□ 0.31
ZNF140P52738 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC17.01■□□□□ 0.31
ZNF140P52738 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC17.01■□□□□ 0.31
ZNF140P52738 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ZNF140P52738 AC008667.4-201ENST00000607370 168 ntBASIC17.01■□□□□ 0.31
ZNF140P52738 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC17.01■□□□□ 0.31
ZNF140P52738 MIR1199-201ENST00000621445 119 ntBASIC17.01■□□□□ 0.31
ZNF140P52738 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC17.01■□□□□ 0.31
ZNF140P52738 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
ZNF140P52738 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
ZNF140P52738 RNF216P1-203ENST00000404404 2427 ntBASIC17.01■□□□□ 0.31
ZNF140P52738 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
ZNF140P52738 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
ZNF140P52738 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ZNF140P52738 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ZNF140P52738 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ZNF140P52738 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC17.01■□□□□ 0.31
ZNF140P52738 AC002310.6-201ENST00000624451 1377 ntBASIC17.01■□□□□ 0.31
ZNF140P52738 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
ZNF140P52738 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ZNF140P52738 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
ZNF140P52738 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
ZNF140P52738 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC17.01■□□□□ 0.31
ZNF140P52738 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC17.01■□□□□ 0.31
ZNF140P52738 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
ZNF140P52738 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC17■□□□□ 0.31
ZNF140P52738 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
ZNF140P52738 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC17■□□□□ 0.31
ZNF140P52738 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC17■□□□□ 0.31
ZNF140P52738 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC17■□□□□ 0.31
ZNF140P52738 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC17■□□□□ 0.31
ZNF140P52738 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC17■□□□□ 0.31
ZNF140P52738 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC17■□□□□ 0.31
ZNF140P52738 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC17■□□□□ 0.31
ZNF140P52738 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ZNF140P52738 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC17■□□□□ 0.31
ZNF140P52738 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
ZNF140P52738 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ZNF140P52738 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ZNF140P52738 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ZNF140P52738 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
ZNF140P52738 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ZNF140P52738 INIP-202ENST00000374236 874 ntTSL 2 BASIC17■□□□□ 0.31
ZNF140P52738 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ZNF140P52738 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
ZNF140P52738 SLC25A6P2-201ENST00000497974 877 ntBASIC17■□□□□ 0.31
ZNF140P52738 CIPC-205ENST00000555437 566 ntTSL 3 BASIC17■□□□□ 0.31
ZNF140P52738 KRT8P49-201ENST00000604166 1432 ntBASIC17■□□□□ 0.31
ZNF140P52738 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC17■□□□□ 0.31
ZNF140P52738 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
ZNF140P52738 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
ZNF140P52738 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC17■□□□□ 0.31
ZNF140P52738 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
ZNF140P52738 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC17■□□□□ 0.31
ZNF140P52738 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
ZNF140P52738 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC17■□□□□ 0.31
ZNF140P52738 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC17■□□□□ 0.31
ZNF140P52738 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC17■□□□□ 0.31
ZNF140P52738 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC17■□□□□ 0.31
ZNF140P52738 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms