Protein–RNA interactions for Protein: P43004

SLC1A2, Excitatory amino acid transporter 2, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A2P43004 GID4-202ENST00000376345 1391 ntTSL 3 BASIC17.08■□□□□ 0.32
SLC1A2P43004 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC17.08■□□□□ 0.32
SLC1A2P43004 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
SLC1A2P43004 EMD-201ENST00000369835 966 ntTSL 3 BASIC17.08■□□□□ 0.32
SLC1A2P43004 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SLC1A2P43004 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC17.08■□□□□ 0.32
SLC1A2P43004 HCG4P8-203ENST00000443049 980 ntBASIC17.08■□□□□ 0.32
SLC1A2P43004 BX005266.1-201ENST00000473402 457 ntBASIC17.08■□□□□ 0.32
SLC1A2P43004 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SLC1A2P43004 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC17.08■□□□□ 0.32
SLC1A2P43004 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SLC1A2P43004 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC17.08■□□□□ 0.32
SLC1A2P43004 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC17.08■□□□□ 0.32
SLC1A2P43004 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.32
SLC1A2P43004 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC17.08■□□□□ 0.32
SLC1A2P43004 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
SLC1A2P43004 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SLC1A2P43004 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SLC1A2P43004 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SLC1A2P43004 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.32
SLC1A2P43004 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SLC1A2P43004 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC17.07■□□□□ 0.32
SLC1A2P43004 HNRNPRP1-201ENST00000453465 1695 ntBASIC17.07■□□□□ 0.32
SLC1A2P43004 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
SLC1A2P43004 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
SLC1A2P43004 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SLC1A2P43004 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SLC1A2P43004 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SLC1A2P43004 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SLC1A2P43004 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SLC1A2P43004 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SLC1A2P43004 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SLC1A2P43004 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SLC1A2P43004 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SLC1A2P43004 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
SLC1A2P43004 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SLC1A2P43004 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SLC1A2P43004 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
SLC1A2P43004 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC17.07■□□□□ 0.32
SLC1A2P43004 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC17.07■□□□□ 0.32
SLC1A2P43004 AC106795.1-205ENST00000512851 1056 ntBASIC17.07■□□□□ 0.32
SLC1A2P43004 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC17.07■□□□□ 0.32
SLC1A2P43004 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC17.07■□□□□ 0.32
SLC1A2P43004 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC17.07■□□□□ 0.32
SLC1A2P43004 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC17.07■□□□□ 0.32
SLC1A2P43004 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SLC1A2P43004 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC17.07■□□□□ 0.32
SLC1A2P43004 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC17.07■□□□□ 0.32
SLC1A2P43004 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC17.07■□□□□ 0.32
SLC1A2P43004 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
SLC1A2P43004 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SLC1A2P43004 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SLC1A2P43004 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SLC1A2P43004 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC17.07■□□□□ 0.32
SLC1A2P43004 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SLC1A2P43004 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
SLC1A2P43004 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC17.07■□□□□ 0.32
SLC1A2P43004 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SLC1A2P43004 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC17.07■□□□□ 0.32
SLC1A2P43004 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SLC1A2P43004 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC17.07■□□□□ 0.32
SLC1A2P43004 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC17.06■□□□□ 0.32
SLC1A2P43004 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SLC1A2P43004 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
SLC1A2P43004 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
SLC1A2P43004 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
SLC1A2P43004 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC17.06■□□□□ 0.32
SLC1A2P43004 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SLC1A2P43004 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
SLC1A2P43004 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC17.06■□□□□ 0.32
SLC1A2P43004 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SLC1A2P43004 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SLC1A2P43004 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
SLC1A2P43004 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SLC1A2P43004 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC17.06■□□□□ 0.32
SLC1A2P43004 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
SLC1A2P43004 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SLC1A2P43004 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
SLC1A2P43004 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
SLC1A2P43004 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC17.06■□□□□ 0.32
SLC1A2P43004 MIR3652-201ENST00000579335 131 ntBASIC17.06■□□□□ 0.32
SLC1A2P43004 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC17.06■□□□□ 0.32
SLC1A2P43004 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
SLC1A2P43004 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SLC1A2P43004 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
SLC1A2P43004 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
SLC1A2P43004 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC17.06■□□□□ 0.32
SLC1A2P43004 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SLC1A2P43004 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SLC1A2P43004 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC17.06■□□□□ 0.32
SLC1A2P43004 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC17.06■□□□□ 0.32
SLC1A2P43004 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
SLC1A2P43004 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SLC1A2P43004 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SLC1A2P43004 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
SLC1A2P43004 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SLC1A2P43004 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SLC1A2P43004 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SLC1A2P43004 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC17.06■□□□□ 0.32
SLC1A2P43004 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms