Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC19.53■□□□□ 0.72
CLCN1P35523 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CLCN1P35523 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CLCN1P35523 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CLCN1P35523 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC19.53■□□□□ 0.72
CLCN1P35523 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CLCN1P35523 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC19.53■□□□□ 0.72
CLCN1P35523 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC19.53■□□□□ 0.72
CLCN1P35523 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC19.53■□□□□ 0.72
CLCN1P35523 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CLCN1P35523 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC19.53■□□□□ 0.72
CLCN1P35523 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC19.53■□□□□ 0.72
CLCN1P35523 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CLCN1P35523 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC19.53■□□□□ 0.72
CLCN1P35523 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
CLCN1P35523 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC19.53■□□□□ 0.72
CLCN1P35523 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CLCN1P35523 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
CLCN1P35523 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CLCN1P35523 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
CLCN1P35523 ADM-208ENST00000534464 1640 ntTSL 2 BASIC19.53■□□□□ 0.72
CLCN1P35523 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC19.53■□□□□ 0.72
CLCN1P35523 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC19.53■□□□□ 0.72
CLCN1P35523 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CLCN1P35523 AC022532.1-201ENST00000624563 1728 ntBASIC19.53■□□□□ 0.72
CLCN1P35523 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
CLCN1P35523 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CLCN1P35523 STK24-203ENST00000397517 4578 ntTSL 2 BASIC19.52■□□□□ 0.72
CLCN1P35523 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
CLCN1P35523 AC016396.2-201ENST00000562575 1417 ntBASIC19.52■□□□□ 0.72
CLCN1P35523 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CLCN1P35523 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
CLCN1P35523 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CLCN1P35523 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CLCN1P35523 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CLCN1P35523 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
CLCN1P35523 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CLCN1P35523 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC19.52■□□□□ 0.72
CLCN1P35523 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CLCN1P35523 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CLCN1P35523 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CLCN1P35523 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC19.52■□□□□ 0.72
CLCN1P35523 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CLCN1P35523 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CLCN1P35523 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC19.52■□□□□ 0.72
CLCN1P35523 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC19.52■□□□□ 0.72
CLCN1P35523 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC19.52■□□□□ 0.72
CLCN1P35523 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC19.52■□□□□ 0.72
CLCN1P35523 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC19.52■□□□□ 0.72
CLCN1P35523 REEP1-209ENST00000541910 969 ntTSL 2 BASIC19.52■□□□□ 0.72
CLCN1P35523 GCSHP2-201ENST00000560971 527 ntBASIC19.52■□□□□ 0.72
CLCN1P35523 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC19.52■□□□□ 0.72
CLCN1P35523 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
CLCN1P35523 AC046185.3-201ENST00000623228 1824 ntBASIC19.52■□□□□ 0.72
CLCN1P35523 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CLCN1P35523 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
CLCN1P35523 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC19.52■□□□□ 0.72
CLCN1P35523 HLA-DQB2-231ENST00000435145 2026 ntBASIC19.52■□□□□ 0.72
CLCN1P35523 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC19.52■□□□□ 0.72
CLCN1P35523 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
CLCN1P35523 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
CLCN1P35523 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
CLCN1P35523 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.71
CLCN1P35523 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
CLCN1P35523 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CLCN1P35523 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC19.51■□□□□ 0.71
CLCN1P35523 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC19.51■□□□□ 0.71
CLCN1P35523 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
CLCN1P35523 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CLCN1P35523 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CLCN1P35523 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CLCN1P35523 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
CLCN1P35523 CASK-202ENST00000378158 3848 ntTSL 5 BASIC19.51■□□□□ 0.71
CLCN1P35523 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CLCN1P35523 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
CLCN1P35523 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC19.51■□□□□ 0.71
CLCN1P35523 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC19.51■□□□□ 0.71
CLCN1P35523 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC19.51■□□□□ 0.71
CLCN1P35523 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC19.51■□□□□ 0.71
CLCN1P35523 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
CLCN1P35523 AL157888.1-201ENST00000631930 593 ntBASIC19.51■□□□□ 0.71
CLCN1P35523 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
CLCN1P35523 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CLCN1P35523 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC19.51■□□□□ 0.71
CLCN1P35523 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CLCN1P35523 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC19.51■□□□□ 0.71
CLCN1P35523 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC19.51■□□□□ 0.71
CLCN1P35523 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CLCN1P35523 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CLCN1P35523 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
CLCN1P35523 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CLCN1P35523 SNX18-202ENST00000343017 3140 ntBASIC19.51■□□□□ 0.71
CLCN1P35523 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CLCN1P35523 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
CLCN1P35523 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CLCN1P35523 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
CLCN1P35523 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CLCN1P35523 ASL-204ENST00000395331 1538 ntTSL 5 BASIC19.51■□□□□ 0.71
CLCN1P35523 AC073508.3-201ENST00000619697 1419 ntBASIC19.51■□□□□ 0.71
CLCN1P35523 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC19.5■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms