Protein–RNA interactions for Protein: P33241

LSP1, Lymphocyte-specific protein 1, humanhuman

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1P33241 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LSP1P33241 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
LSP1P33241 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
LSP1P33241 EGFEM1P-202ENST00000431685 1563 ntBASIC17.23■□□□□ 0.35
LSP1P33241 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
LSP1P33241 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC17.23■□□□□ 0.35
LSP1P33241 AC006058.4-201ENST00000624016 1670 ntBASIC17.23■□□□□ 0.35
LSP1P33241 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
LSP1P33241 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LSP1P33241 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
LSP1P33241 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC17.23■□□□□ 0.35
LSP1P33241 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LSP1P33241 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC17.23■□□□□ 0.35
LSP1P33241 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
LSP1P33241 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
LSP1P33241 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
LSP1P33241 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LSP1P33241 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LSP1P33241 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LSP1P33241 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LSP1P33241 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LSP1P33241 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
LSP1P33241 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC17.23■□□□□ 0.35
LSP1P33241 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
LSP1P33241 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LSP1P33241 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC17.23■□□□□ 0.35
LSP1P33241 ADM-205ENST00000528544 586 ntTSL 2 BASIC17.23■□□□□ 0.35
LSP1P33241 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC17.23■□□□□ 0.35
LSP1P33241 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC17.23■□□□□ 0.35
LSP1P33241 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC17.23■□□□□ 0.35
LSP1P33241 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC17.23■□□□□ 0.35
LSP1P33241 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC17.23■□□□□ 0.35
LSP1P33241 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
LSP1P33241 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
LSP1P33241 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LSP1P33241 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
LSP1P33241 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
LSP1P33241 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC17.23■□□□□ 0.35
LSP1P33241 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
LSP1P33241 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LSP1P33241 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
LSP1P33241 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
LSP1P33241 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LSP1P33241 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LSP1P33241 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
LSP1P33241 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LSP1P33241 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC17.22■□□□□ 0.35
LSP1P33241 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
LSP1P33241 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
LSP1P33241 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
LSP1P33241 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC17.22■□□□□ 0.35
LSP1P33241 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
LSP1P33241 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
LSP1P33241 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC17.22■□□□□ 0.35
LSP1P33241 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LSP1P33241 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC17.22■□□□□ 0.35
LSP1P33241 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
LSP1P33241 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
LSP1P33241 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC17.22■□□□□ 0.35
LSP1P33241 AC002558.1-201ENST00000488906 803 ntBASIC17.22■□□□□ 0.35
LSP1P33241 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
LSP1P33241 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
LSP1P33241 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC17.22■□□□□ 0.35
LSP1P33241 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC17.22■□□□□ 0.35
LSP1P33241 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LSP1P33241 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LSP1P33241 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
LSP1P33241 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
LSP1P33241 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC17.22■□□□□ 0.35
LSP1P33241 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
LSP1P33241 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LSP1P33241 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC17.22■□□□□ 0.35
LSP1P33241 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
LSP1P33241 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
LSP1P33241 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
LSP1P33241 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LSP1P33241 FAM45BP-202ENST00000592932 1624 ntBASIC17.21■□□□□ 0.35
LSP1P33241 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
LSP1P33241 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
LSP1P33241 GCK-202ENST00000345378 2421 ntTSL 2 BASIC17.21■□□□□ 0.35
LSP1P33241 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
LSP1P33241 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LSP1P33241 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
LSP1P33241 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.35
LSP1P33241 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LSP1P33241 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
LSP1P33241 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LSP1P33241 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
LSP1P33241 AL596087.1-201ENST00000400979 1969 ntBASIC17.21■□□□□ 0.35
LSP1P33241 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LSP1P33241 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LSP1P33241 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
LSP1P33241 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LSP1P33241 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LSP1P33241 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
LSP1P33241 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LSP1P33241 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LSP1P33241 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LSP1P33241 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
LSP1P33241 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms