Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RETP07949 HLA-DQB1-201ENST00000374943 1656 ntBASIC17.28■□□□□ 0.36
RETP07949 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RETP07949 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RETP07949 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
RETP07949 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
RETP07949 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC17.28■□□□□ 0.36
RETP07949 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
RETP07949 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC17.28■□□□□ 0.36
RETP07949 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RETP07949 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC17.28■□□□□ 0.36
RETP07949 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
RETP07949 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RETP07949 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC17.27■□□□□ 0.36
RETP07949 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
RETP07949 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC17.27■□□□□ 0.36
RETP07949 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC17.27■□□□□ 0.36
RETP07949 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
RETP07949 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC17.27■□□□□ 0.36
RETP07949 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RETP07949 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RETP07949 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RETP07949 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
RETP07949 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RETP07949 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
RETP07949 AL627223.1-201ENST00000416693 442 ntBASIC17.27■□□□□ 0.36
RETP07949 TSPY16P-201ENST00000449843 468 ntBASIC17.27■□□□□ 0.36
RETP07949 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC17.27■□□□□ 0.36
RETP07949 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC17.27■□□□□ 0.36
RETP07949 YTHDF3-AS1-201ENST00000603538 718 ntBASIC17.27■□□□□ 0.36
RETP07949 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC17.27■□□□□ 0.36
RETP07949 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
RETP07949 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
RETP07949 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC17.27■□□□□ 0.35
RETP07949 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
RETP07949 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC17.27■□□□□ 0.35
RETP07949 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
RETP07949 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
RETP07949 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC17.27■□□□□ 0.35
RETP07949 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
RETP07949 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC17.27■□□□□ 0.35
RETP07949 FUT8-AS1-201ENST00000621019 1521 ntBASIC17.26■□□□□ 0.35
RETP07949 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
RETP07949 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RETP07949 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RETP07949 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RETP07949 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC17.26■□□□□ 0.35
RETP07949 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC17.26■□□□□ 0.35
RETP07949 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
RETP07949 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RETP07949 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RETP07949 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
RETP07949 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RETP07949 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RETP07949 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RETP07949 GSAP-205ENST00000430584 600 ntTSL 5 BASIC17.26■□□□□ 0.35
RETP07949 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC17.26■□□□□ 0.35
RETP07949 NAA60-208ENST00000570819 833 ntTSL 2 BASIC17.26■□□□□ 0.35
RETP07949 MNT-208ENST00000575394 606 ntTSL 4 BASIC17.26■□□□□ 0.35
RETP07949 RN7SL204P-201ENST00000582831 262 ntBASIC17.26■□□□□ 0.35
RETP07949 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC17.26■□□□□ 0.35
RETP07949 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC17.26■□□□□ 0.35
RETP07949 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC17.26■□□□□ 0.35
RETP07949 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RETP07949 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RETP07949 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC17.26■□□□□ 0.35
RETP07949 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RETP07949 GMCL1P1-201ENST00000463439 1581 ntBASIC17.26■□□□□ 0.35
RETP07949 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RETP07949 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC17.26■□□□□ 0.35
RETP07949 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
RETP07949 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RETP07949 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RETP07949 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RETP07949 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RETP07949 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RETP07949 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RETP07949 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RETP07949 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
RETP07949 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RETP07949 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
RETP07949 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RETP07949 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
RETP07949 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
RETP07949 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RETP07949 TFAMP1-201ENST00000412727 736 ntBASIC17.25■□□□□ 0.35
RETP07949 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC17.25■□□□□ 0.35
RETP07949 HNRNPA1P40-201ENST00000426371 1278 ntBASIC17.25■□□□□ 0.35
RETP07949 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC17.25■□□□□ 0.35
RETP07949 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RETP07949 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC17.25■□□□□ 0.35
RETP07949 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RETP07949 VPS29-207ENST00000549970 818 ntTSL 3 BASIC17.25■□□□□ 0.35
RETP07949 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
RETP07949 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
RETP07949 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC17.25■□□□□ 0.35
RETP07949 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RETP07949 AL645608.8-201ENST00000606034 2086 ntBASIC17.25■□□□□ 0.35
RETP07949 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RETP07949 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms