Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PDGFBP01127 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC17.04■□□□□ 0.32
PDGFBP01127 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
PDGFBP01127 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PDGFBP01127 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC17.04■□□□□ 0.32
PDGFBP01127 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
PDGFBP01127 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PDGFBP01127 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
PDGFBP01127 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PDGFBP01127 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
PDGFBP01127 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC17.04■□□□□ 0.32
PDGFBP01127 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
PDGFBP01127 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PDGFBP01127 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
PDGFBP01127 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PDGFBP01127 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PDGFBP01127 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC17.04■□□□□ 0.32
PDGFBP01127 MPV17-208ENST00000405076 603 ntTSL 5 BASIC17.04■□□□□ 0.32
PDGFBP01127 AC087499.6-201ENST00000411576 835 ntBASIC17.04■□□□□ 0.32
PDGFBP01127 NME6-203ENST00000415644 849 ntTSL 2 BASIC17.04■□□□□ 0.32
PDGFBP01127 TTTY23B-201ENST00000442790 549 ntBASIC17.04■□□□□ 0.32
PDGFBP01127 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
PDGFBP01127 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PDGFBP01127 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC17.04■□□□□ 0.32
PDGFBP01127 GLI4-203ENST00000517468 963 ntTSL 5 BASIC17.04■□□□□ 0.32
PDGFBP01127 SNX29P1-201ENST00000548357 1007 ntBASIC17.04■□□□□ 0.32
PDGFBP01127 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PDGFBP01127 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC17.04■□□□□ 0.32
PDGFBP01127 AL589739.1-201ENST00000607720 493 ntBASIC17.04■□□□□ 0.32
PDGFBP01127 WT1-AS_2.1-201ENST00000613208 137 ntBASIC17.04■□□□□ 0.32
PDGFBP01127 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
PDGFBP01127 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PDGFBP01127 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
PDGFBP01127 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
PDGFBP01127 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC17.04■□□□□ 0.32
PDGFBP01127 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PDGFBP01127 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
PDGFBP01127 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PDGFBP01127 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
PDGFBP01127 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC17.04■□□□□ 0.32
PDGFBP01127 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC17.04■□□□□ 0.32
PDGFBP01127 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
PDGFBP01127 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
PDGFBP01127 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC17.04■□□□□ 0.32
PDGFBP01127 SLC22A20-204ENST00000530038 1673 ntBASIC17.04■□□□□ 0.32
PDGFBP01127 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC17.04■□□□□ 0.32
PDGFBP01127 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC17.04■□□□□ 0.32
PDGFBP01127 REXO1L9P-201ENST00000604264 2108 ntBASIC17.03■□□□□ 0.32
PDGFBP01127 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
PDGFBP01127 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC17.03■□□□□ 0.32
PDGFBP01127 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PDGFBP01127 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PDGFBP01127 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
PDGFBP01127 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC17.03■□□□□ 0.32
PDGFBP01127 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC17.03■□□□□ 0.32
PDGFBP01127 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
PDGFBP01127 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC17.03■□□□□ 0.32
PDGFBP01127 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PDGFBP01127 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PDGFBP01127 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC17.03■□□□□ 0.32
PDGFBP01127 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC17.03■□□□□ 0.32
PDGFBP01127 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC17.03■□□□□ 0.32
PDGFBP01127 MIR6775-201ENST00000617557 69 ntBASIC17.03■□□□□ 0.32
PDGFBP01127 AC068587.10-201ENST00000641210 219 ntBASIC17.03■□□□□ 0.32
PDGFBP01127 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PDGFBP01127 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PDGFBP01127 CETN4P-206ENST00000642099 2168 ntBASIC17.03■□□□□ 0.32
PDGFBP01127 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC17.03■□□□□ 0.32
PDGFBP01127 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
PDGFBP01127 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
PDGFBP01127 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PDGFBP01127 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC17.03■□□□□ 0.32
PDGFBP01127 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC17.03■□□□□ 0.32
PDGFBP01127 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC17.03■□□□□ 0.32
PDGFBP01127 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC17.03■□□□□ 0.32
PDGFBP01127 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
PDGFBP01127 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PDGFBP01127 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC17.02■□□□□ 0.32
PDGFBP01127 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PDGFBP01127 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PDGFBP01127 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
PDGFBP01127 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC17.02■□□□□ 0.32
PDGFBP01127 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
PDGFBP01127 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
PDGFBP01127 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC17.02■□□□□ 0.32
PDGFBP01127 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
PDGFBP01127 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
PDGFBP01127 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PDGFBP01127 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC17.02■□□□□ 0.32
PDGFBP01127 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC17.02■□□□□ 0.32
PDGFBP01127 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC17.02■□□□□ 0.32
PDGFBP01127 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC17.02■□□□□ 0.32
PDGFBP01127 AC105233.2-201ENST00000523697 349 ntBASIC17.02■□□□□ 0.32
PDGFBP01127 AF228730.5-201ENST00000530288 346 ntBASIC17.02■□□□□ 0.32
PDGFBP01127 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC17.02■□□□□ 0.32
PDGFBP01127 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC17.02■□□□□ 0.32
PDGFBP01127 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC17.02■□□□□ 0.32
PDGFBP01127 AL139327.4-201ENST00000612362 153 ntBASIC17.02■□□□□ 0.32
PDGFBP01127 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.32
PDGFBP01127 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC17.02■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms