Protein–RNA interactions for Protein: O95170

CDRT1, CMT1A duplicated region transcript 1 protein, humanhuman

Predictions only

Length 752 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1O95170 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC15.35■□□□□ 0.05
CDRT1O95170 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CDRT1O95170 GLDC-219ENST00000640208 420 ntTSL 2 BASIC15.35■□□□□ 0.05
CDRT1O95170 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CDRT1O95170 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CDRT1O95170 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC15.35■□□□□ 0.05
CDRT1O95170 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
CDRT1O95170 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC15.35■□□□□ 0.05
CDRT1O95170 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CDRT1O95170 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
CDRT1O95170 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CDRT1O95170 AC005052.1-201ENST00000625181 2492 ntBASIC15.35■□□□□ 0.05
CDRT1O95170 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
CDRT1O95170 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC15.34■□□□□ 0.05
CDRT1O95170 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
CDRT1O95170 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CDRT1O95170 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CDRT1O95170 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC15.34■□□□□ 0.05
CDRT1O95170 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
CDRT1O95170 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CDRT1O95170 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
CDRT1O95170 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CDRT1O95170 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CDRT1O95170 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CDRT1O95170 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC15.34■□□□□ 0.05
CDRT1O95170 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CDRT1O95170 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
CDRT1O95170 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC15.34■□□□□ 0.05
CDRT1O95170 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CDRT1O95170 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CDRT1O95170 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CDRT1O95170 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
CDRT1O95170 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
CDRT1O95170 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CDRT1O95170 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
CDRT1O95170 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC15.34■□□□□ 0.05
CDRT1O95170 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC15.34■□□□□ 0.05
CDRT1O95170 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC15.34■□□□□ 0.05
CDRT1O95170 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC15.34■□□□□ 0.05
CDRT1O95170 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC15.34■□□□□ 0.05
CDRT1O95170 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC15.34■□□□□ 0.05
CDRT1O95170 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
CDRT1O95170 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC15.34■□□□□ 0.05
CDRT1O95170 AC023824.1-201ENST00000562945 2975 ntBASIC15.34■□□□□ 0.05
CDRT1O95170 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CDRT1O95170 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CDRT1O95170 ACE-204ENST00000428043 5120 ntTSL 2 BASIC15.34■□□□□ 0.05
CDRT1O95170 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
CDRT1O95170 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CDRT1O95170 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC15.34■□□□□ 0.05
CDRT1O95170 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
CDRT1O95170 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CDRT1O95170 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
CDRT1O95170 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
CDRT1O95170 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CDRT1O95170 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CDRT1O95170 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC15.34■□□□□ 0.05
CDRT1O95170 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
CDRT1O95170 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.05
CDRT1O95170 PBK-203ENST00000522944 1499 ntTSL 2 BASIC15.33■□□□□ 0.05
CDRT1O95170 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
CDRT1O95170 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
CDRT1O95170 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
CDRT1O95170 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC15.33■□□□□ 0.05
CDRT1O95170 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC15.33■□□□□ 0.05
CDRT1O95170 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC15.33■□□□□ 0.04
CDRT1O95170 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC15.33■□□□□ 0.04
CDRT1O95170 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC15.33■□□□□ 0.04
CDRT1O95170 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
CDRT1O95170 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CDRT1O95170 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CDRT1O95170 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CDRT1O95170 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
CDRT1O95170 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC15.33■□□□□ 0.04
CDRT1O95170 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC15.33■□□□□ 0.04
CDRT1O95170 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CDRT1O95170 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC15.33■□□□□ 0.04
CDRT1O95170 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC15.33■□□□□ 0.04
CDRT1O95170 MIR3917-201ENST00000580971 93 ntBASIC15.33■□□□□ 0.04
CDRT1O95170 AC010947.1-201ENST00000623454 693 ntBASIC15.33■□□□□ 0.04
CDRT1O95170 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
CDRT1O95170 AC092865.7-201ENST00000641832 219 ntBASIC15.33■□□□□ 0.04
CDRT1O95170 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CDRT1O95170 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CDRT1O95170 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC15.33■□□□□ 0.04
CDRT1O95170 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CDRT1O95170 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CDRT1O95170 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CDRT1O95170 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
CDRT1O95170 CASK-202ENST00000378158 3848 ntTSL 5 BASIC15.33■□□□□ 0.04
CDRT1O95170 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
CDRT1O95170 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CDRT1O95170 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CDRT1O95170 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CDRT1O95170 AL365203.3-201ENST00000609742 2057 ntBASIC15.32■□□□□ 0.04
CDRT1O95170 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDRT1O95170 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CDRT1O95170 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC15.32■□□□□ 0.04
CDRT1O95170 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC15.32■□□□□ 0.04
CDRT1O95170 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms