Protein–RNA interactions for Protein: O43638

FOXS1, Forkhead box protein S1, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXS1O43638 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC16.07■□□□□ 0.16
FOXS1O43638 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
FOXS1O43638 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
FOXS1O43638 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
FOXS1O43638 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
FOXS1O43638 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
FOXS1O43638 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
FOXS1O43638 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
FOXS1O43638 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
FOXS1O43638 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
FOXS1O43638 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC16.06■□□□□ 0.16
FOXS1O43638 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
FOXS1O43638 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
FOXS1O43638 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
FOXS1O43638 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
FOXS1O43638 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
FOXS1O43638 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC16.06■□□□□ 0.16
FOXS1O43638 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
FOXS1O43638 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
FOXS1O43638 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC16.06■□□□□ 0.16
FOXS1O43638 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
FOXS1O43638 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
FOXS1O43638 AC025580.3-201ENST00000617932 1424 ntBASIC16.06■□□□□ 0.16
FOXS1O43638 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
FOXS1O43638 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
FOXS1O43638 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC16.06■□□□□ 0.16
FOXS1O43638 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
FOXS1O43638 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
FOXS1O43638 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
FOXS1O43638 YBX2P1-201ENST00000394192 760 ntBASIC16.06■□□□□ 0.16
FOXS1O43638 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
FOXS1O43638 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
FOXS1O43638 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC16.06■□□□□ 0.16
FOXS1O43638 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
FOXS1O43638 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC16.06■□□□□ 0.16
FOXS1O43638 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
FOXS1O43638 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC16.06■□□□□ 0.16
FOXS1O43638 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC16.06■□□□□ 0.16
FOXS1O43638 MMP17-203ENST00000535004 719 ntTSL 3 BASIC16.06■□□□□ 0.16
FOXS1O43638 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
FOXS1O43638 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC16.06■□□□□ 0.16
FOXS1O43638 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
FOXS1O43638 AC002347.1-201ENST00000569543 541 ntBASIC16.06■□□□□ 0.16
FOXS1O43638 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
FOXS1O43638 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
FOXS1O43638 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC16.06■□□□□ 0.16
FOXS1O43638 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC16.06■□□□□ 0.16
FOXS1O43638 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
FOXS1O43638 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
FOXS1O43638 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC16.06■□□□□ 0.16
FOXS1O43638 HCG11-201ENST00000411553 5696 ntBASIC16.06■□□□□ 0.16
FOXS1O43638 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
FOXS1O43638 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
FOXS1O43638 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
FOXS1O43638 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
FOXS1O43638 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
FOXS1O43638 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
FOXS1O43638 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
FOXS1O43638 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
FOXS1O43638 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC16.05■□□□□ 0.16
FOXS1O43638 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
FOXS1O43638 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
FOXS1O43638 TOP3BP1-201ENST00000420768 1380 ntBASIC16.05■□□□□ 0.16
FOXS1O43638 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
FOXS1O43638 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
FOXS1O43638 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
FOXS1O43638 BX842568.4-201ENST00000421222 227 ntBASIC16.05■□□□□ 0.16
FOXS1O43638 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
FOXS1O43638 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC16.05■□□□□ 0.16
FOXS1O43638 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC16.05■□□□□ 0.16
FOXS1O43638 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
FOXS1O43638 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC16.05■□□□□ 0.16
FOXS1O43638 AC023141.13-201ENST00000604991 943 ntBASIC16.05■□□□□ 0.16
FOXS1O43638 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC16.05■□□□□ 0.16
FOXS1O43638 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC16.05■□□□□ 0.16
FOXS1O43638 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC16.05■□□□□ 0.16
FOXS1O43638 AC007064.4-201ENST00000637740 555 ntBASIC16.05■□□□□ 0.16
FOXS1O43638 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
FOXS1O43638 AC092068.3-201ENST00000587894 2016 ntBASIC16.05■□□□□ 0.16
FOXS1O43638 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
FOXS1O43638 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
FOXS1O43638 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC16.05■□□□□ 0.16
FOXS1O43638 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC16.05■□□□□ 0.16
FOXS1O43638 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
FOXS1O43638 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC16.05■□□□□ 0.16
FOXS1O43638 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
FOXS1O43638 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
FOXS1O43638 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
FOXS1O43638 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC16.05■□□□□ 0.16
FOXS1O43638 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
FOXS1O43638 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC16.05■□□□□ 0.16
FOXS1O43638 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC16.05■□□□□ 0.16
FOXS1O43638 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
FOXS1O43638 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
FOXS1O43638 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC16.04■□□□□ 0.16
FOXS1O43638 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC16.04■□□□□ 0.16
FOXS1O43638 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
FOXS1O43638 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
FOXS1O43638 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC16.04■□□□□ 0.16
FOXS1O43638 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms