Protein–RNA interactions for Protein: O43623

SNAI2, Zinc finger protein SNAI2, humanhuman

Predictions only

Length 268 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI2O43623 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC12.89□□□□□ -0.35
SNAI2O43623 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
SNAI2O43623 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
SNAI2O43623 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SNAI2O43623 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SNAI2O43623 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC12.89□□□□□ -0.35
SNAI2O43623 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
SNAI2O43623 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC12.89□□□□□ -0.35
SNAI2O43623 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SNAI2O43623 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SNAI2O43623 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
SNAI2O43623 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC12.89□□□□□ -0.35
SNAI2O43623 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC12.89□□□□□ -0.35
SNAI2O43623 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SNAI2O43623 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SNAI2O43623 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC12.89□□□□□ -0.35
SNAI2O43623 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SNAI2O43623 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC12.89□□□□□ -0.35
SNAI2O43623 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SNAI2O43623 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SNAI2O43623 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SNAI2O43623 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
SNAI2O43623 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SNAI2O43623 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
SNAI2O43623 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC12.88□□□□□ -0.35
SNAI2O43623 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
SNAI2O43623 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
SNAI2O43623 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC12.88□□□□□ -0.35
SNAI2O43623 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC12.88□□□□□ -0.35
SNAI2O43623 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC12.88□□□□□ -0.35
SNAI2O43623 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
SNAI2O43623 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
SNAI2O43623 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC12.88□□□□□ -0.35
SNAI2O43623 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC12.88□□□□□ -0.35
SNAI2O43623 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SNAI2O43623 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC12.88□□□□□ -0.35
SNAI2O43623 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
SNAI2O43623 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SNAI2O43623 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
SNAI2O43623 MIR600HG-201ENST00000449175 5984 ntBASIC12.88□□□□□ -0.35
SNAI2O43623 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SNAI2O43623 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SNAI2O43623 GAD2-202ENST00000376248 680 ntTSL 5 BASIC12.88□□□□□ -0.35
SNAI2O43623 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
SNAI2O43623 AC009947.2-201ENST00000444014 672 ntBASIC12.88□□□□□ -0.35
SNAI2O43623 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
SNAI2O43623 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC12.88□□□□□ -0.35
SNAI2O43623 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
SNAI2O43623 REXO2-216ENST00000544196 452 ntTSL 3 BASIC12.88□□□□□ -0.35
SNAI2O43623 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SNAI2O43623 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SNAI2O43623 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
SNAI2O43623 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
SNAI2O43623 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
SNAI2O43623 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SNAI2O43623 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
SNAI2O43623 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC12.88□□□□□ -0.35
SNAI2O43623 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SNAI2O43623 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SNAI2O43623 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
SNAI2O43623 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SNAI2O43623 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SNAI2O43623 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
SNAI2O43623 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC12.88□□□□□ -0.35
SNAI2O43623 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC12.88□□□□□ -0.35
SNAI2O43623 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
SNAI2O43623 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC12.88□□□□□ -0.35
SNAI2O43623 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC12.88□□□□□ -0.35
SNAI2O43623 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
SNAI2O43623 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SNAI2O43623 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC12.87□□□□□ -0.35
SNAI2O43623 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
SNAI2O43623 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
SNAI2O43623 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
SNAI2O43623 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC12.87□□□□□ -0.35
SNAI2O43623 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SNAI2O43623 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
SNAI2O43623 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC12.87□□□□□ -0.35
SNAI2O43623 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC12.87□□□□□ -0.35
SNAI2O43623 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
SNAI2O43623 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
SNAI2O43623 AC007950.2-201ENST00000615045 2347 ntBASIC12.87□□□□□ -0.35
SNAI2O43623 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SNAI2O43623 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC12.87□□□□□ -0.35
SNAI2O43623 TSPY14P-201ENST00000303979 915 ntBASIC12.87□□□□□ -0.35
SNAI2O43623 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SNAI2O43623 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
SNAI2O43623 PEX7-202ENST00000367756 680 ntTSL 3 BASIC12.87□□□□□ -0.35
SNAI2O43623 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
SNAI2O43623 HES2-202ENST00000377836 507 ntTSL 2 BASIC12.87□□□□□ -0.35
SNAI2O43623 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC12.87□□□□□ -0.35
SNAI2O43623 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
SNAI2O43623 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SNAI2O43623 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC12.87□□□□□ -0.35
SNAI2O43623 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC12.87□□□□□ -0.35
SNAI2O43623 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC12.87□□□□□ -0.35
SNAI2O43623 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
SNAI2O43623 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC12.87□□□□□ -0.35
SNAI2O43623 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC12.87□□□□□ -0.35
SNAI2O43623 AL512604.3-201ENST00000569583 964 ntBASIC12.87□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 56.3 ms