Protein–RNA interactions for Protein: O14958

CASQ2, Calsequestrin-2, humanhuman

Predicted RBP Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASQ2O14958 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CASQ2O14958 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC16.32■□□□□ 0.2
CASQ2O14958 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CASQ2O14958 KRT16P1-201ENST00000399124 1418 ntBASIC16.32■□□□□ 0.2
CASQ2O14958 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC16.32■□□□□ 0.2
CASQ2O14958 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC16.32■□□□□ 0.2
CASQ2O14958 CDCA4P2-201ENST00000441182 718 ntBASIC16.32■□□□□ 0.2
CASQ2O14958 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC16.32■□□□□ 0.2
CASQ2O14958 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC16.32■□□□□ 0.2
CASQ2O14958 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CASQ2O14958 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC16.32■□□□□ 0.2
CASQ2O14958 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC16.32■□□□□ 0.2
CASQ2O14958 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC16.32■□□□□ 0.2
CASQ2O14958 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CASQ2O14958 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CASQ2O14958 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC16.32■□□□□ 0.2
CASQ2O14958 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CASQ2O14958 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC16.32■□□□□ 0.2
CASQ2O14958 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CASQ2O14958 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CASQ2O14958 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CASQ2O14958 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CASQ2O14958 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CASQ2O14958 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CASQ2O14958 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC16.31■□□□□ 0.2
CASQ2O14958 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CASQ2O14958 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CASQ2O14958 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC16.31■□□□□ 0.2
CASQ2O14958 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CASQ2O14958 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CASQ2O14958 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CASQ2O14958 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC16.31■□□□□ 0.2
CASQ2O14958 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CASQ2O14958 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CASQ2O14958 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
CASQ2O14958 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CASQ2O14958 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CASQ2O14958 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC16.31■□□□□ 0.2
CASQ2O14958 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CASQ2O14958 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CASQ2O14958 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CASQ2O14958 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC16.31■□□□□ 0.2
CASQ2O14958 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
CASQ2O14958 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CASQ2O14958 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CASQ2O14958 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CASQ2O14958 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CASQ2O14958 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC16.31■□□□□ 0.2
CASQ2O14958 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CASQ2O14958 B3GAT3P1-201ENST00000471720 806 ntBASIC16.31■□□□□ 0.2
CASQ2O14958 CA15P1-201ENST00000481698 905 ntBASIC16.31■□□□□ 0.2
CASQ2O14958 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
CASQ2O14958 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC16.31■□□□□ 0.2
CASQ2O14958 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC16.31■□□□□ 0.2
CASQ2O14958 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC16.31■□□□□ 0.2
CASQ2O14958 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC16.31■□□□□ 0.2
CASQ2O14958 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC16.31■□□□□ 0.2
CASQ2O14958 AC080038.1-201ENST00000611274 1154 ntBASIC16.31■□□□□ 0.2
CASQ2O14958 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
CASQ2O14958 INO80E-214ENST00000620599 515 ntTSL 2 BASIC16.31■□□□□ 0.2
CASQ2O14958 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC16.31■□□□□ 0.2
CASQ2O14958 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CASQ2O14958 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC16.31■□□□□ 0.2
CASQ2O14958 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CASQ2O14958 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC16.31■□□□□ 0.2
CASQ2O14958 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CASQ2O14958 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CASQ2O14958 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC16.31■□□□□ 0.2
CASQ2O14958 BLK-205ENST00000529894 2017 ntTSL 5 BASIC16.31■□□□□ 0.2
CASQ2O14958 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CASQ2O14958 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CASQ2O14958 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CASQ2O14958 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CASQ2O14958 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CASQ2O14958 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC16.31■□□□□ 0.2
CASQ2O14958 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
CASQ2O14958 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CASQ2O14958 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC16.31■□□□□ 0.2
CASQ2O14958 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC16.31■□□□□ 0.2
CASQ2O14958 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
CASQ2O14958 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
CASQ2O14958 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC16.3■□□□□ 0.2
CASQ2O14958 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC16.3■□□□□ 0.2
CASQ2O14958 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CASQ2O14958 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CASQ2O14958 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
CASQ2O14958 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CASQ2O14958 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC16.3■□□□□ 0.2
CASQ2O14958 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CASQ2O14958 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
CASQ2O14958 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
CASQ2O14958 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CASQ2O14958 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC16.3■□□□□ 0.2
CASQ2O14958 AC144831.1-201ENST00000573312 2656 ntBASIC16.3■□□□□ 0.2
CASQ2O14958 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CASQ2O14958 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CASQ2O14958 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CASQ2O14958 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC16.3■□□□□ 0.2
CASQ2O14958 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC16.3■□□□□ 0.2
CASQ2O14958 AP002982.1-201ENST00000492365 877 ntBASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms