Protein–RNA interactions for Protein: O00311

CDC7, Cell division cycle 7-related protein kinase, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC7O00311 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC16.83■□□□□ 0.28
CDC7O00311 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC16.83■□□□□ 0.28
CDC7O00311 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC16.83■□□□□ 0.28
CDC7O00311 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC16.83■□□□□ 0.28
CDC7O00311 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC16.83■□□□□ 0.28
CDC7O00311 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CDC7O00311 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC16.83■□□□□ 0.28
CDC7O00311 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CDC7O00311 AC092171.3-201ENST00000610122 2651 ntBASIC16.83■□□□□ 0.28
CDC7O00311 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC16.82■□□□□ 0.28
CDC7O00311 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC16.82■□□□□ 0.28
CDC7O00311 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC16.82■□□□□ 0.28
CDC7O00311 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDC7O00311 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
CDC7O00311 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDC7O00311 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC16.82■□□□□ 0.28
CDC7O00311 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CDC7O00311 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CDC7O00311 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CDC7O00311 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDC7O00311 OS9-205ENST00000413095 1660 ntTSL 2 BASIC16.82■□□□□ 0.28
CDC7O00311 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC16.82■□□□□ 0.28
CDC7O00311 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDC7O00311 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC16.82■□□□□ 0.28
CDC7O00311 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDC7O00311 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDC7O00311 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
CDC7O00311 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
CDC7O00311 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CDC7O00311 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDC7O00311 LSM5-204ENST00000409909 740 ntTSL 2 BASIC16.82■□□□□ 0.28
CDC7O00311 AC106795.1-205ENST00000512851 1056 ntBASIC16.82■□□□□ 0.28
CDC7O00311 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC16.82■□□□□ 0.28
CDC7O00311 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CDC7O00311 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC16.82■□□□□ 0.28
CDC7O00311 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDC7O00311 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC16.82■□□□□ 0.28
CDC7O00311 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CDC7O00311 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC16.82■□□□□ 0.28
CDC7O00311 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC16.82■□□□□ 0.28
CDC7O00311 PCDHB17P-201ENST00000539533 2393 ntBASIC16.82■□□□□ 0.28
CDC7O00311 AL118508.1-201ENST00000613502 2345 ntBASIC16.82■□□□□ 0.28
CDC7O00311 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDC7O00311 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDC7O00311 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC16.82■□□□□ 0.28
CDC7O00311 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
CDC7O00311 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDC7O00311 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC16.82■□□□□ 0.28
CDC7O00311 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDC7O00311 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC16.82■□□□□ 0.28
CDC7O00311 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC16.82■□□□□ 0.28
CDC7O00311 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDC7O00311 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDC7O00311 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDC7O00311 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDC7O00311 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDC7O00311 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDC7O00311 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDC7O00311 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CDC7O00311 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
CDC7O00311 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CDC7O00311 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
CDC7O00311 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDC7O00311 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDC7O00311 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CDC7O00311 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDC7O00311 GID4-202ENST00000376345 1391 ntTSL 3 BASIC16.81■□□□□ 0.28
CDC7O00311 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
CDC7O00311 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDC7O00311 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CDC7O00311 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDC7O00311 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDC7O00311 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
CDC7O00311 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
CDC7O00311 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
CDC7O00311 KRT18P31-201ENST00000506277 1292 ntBASIC16.81■□□□□ 0.28
CDC7O00311 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC16.81■□□□□ 0.28
CDC7O00311 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC16.81■□□□□ 0.28
CDC7O00311 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC16.81■□□□□ 0.28
CDC7O00311 NKAPP1-205ENST00000585790 367 ntBASIC16.81■□□□□ 0.28
CDC7O00311 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC16.81■□□□□ 0.28
CDC7O00311 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC16.81■□□□□ 0.28
CDC7O00311 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC16.81■□□□□ 0.28
CDC7O00311 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
CDC7O00311 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDC7O00311 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDC7O00311 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CDC7O00311 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
CDC7O00311 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CDC7O00311 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDC7O00311 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
CDC7O00311 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDC7O00311 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CDC7O00311 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC16.8■□□□□ 0.28
CDC7O00311 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDC7O00311 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDC7O00311 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDC7O00311 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDC7O00311 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDC7O00311 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms