Protein–RNA interactions for Protein: A0A140T963

RNF103-CHMP3, RNF103-CHMP3 readthrough (Fragment), humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF103-CHMP3A0A140T963 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RNF103-CHMP3A0A140T963 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RNF103-CHMP3A0A140T963 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC16.59■□□□□ 0.25
RNF103-CHMP3A0A140T963 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
RNF103-CHMP3A0A140T963 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
RNF103-CHMP3A0A140T963 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RNF103-CHMP3A0A140T963 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC16.59■□□□□ 0.25
RNF103-CHMP3A0A140T963 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
RNF103-CHMP3A0A140T963 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
RNF103-CHMP3A0A140T963 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC16.58■□□□□ 0.25
RNF103-CHMP3A0A140T963 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
RNF103-CHMP3A0A140T963 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
RNF103-CHMP3A0A140T963 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
RNF103-CHMP3A0A140T963 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.25
RNF103-CHMP3A0A140T963 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
RNF103-CHMP3A0A140T963 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
RNF103-CHMP3A0A140T963 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
RNF103-CHMP3A0A140T963 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RNF103-CHMP3A0A140T963 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RNF103-CHMP3A0A140T963 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
RNF103-CHMP3A0A140T963 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC16.58■□□□□ 0.24
RNF103-CHMP3A0A140T963 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC16.58■□□□□ 0.24
RNF103-CHMP3A0A140T963 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC16.58■□□□□ 0.24
RNF103-CHMP3A0A140T963 AC005104.2-201ENST00000427818 678 ntBASIC16.58■□□□□ 0.24
RNF103-CHMP3A0A140T963 SPDYE13P-201ENST00000445314 798 ntBASIC16.58■□□□□ 0.24
RNF103-CHMP3A0A140T963 AC104076.2-201ENST00000448912 469 ntBASIC16.58■□□□□ 0.24
RNF103-CHMP3A0A140T963 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC16.58■□□□□ 0.24
RNF103-CHMP3A0A140T963 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC16.58■□□□□ 0.24
RNF103-CHMP3A0A140T963 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC16.58■□□□□ 0.24
RNF103-CHMP3A0A140T963 CLN6-204ENST00000564752 900 ntTSL 3 BASIC16.58■□□□□ 0.24
RNF103-CHMP3A0A140T963 CLN6-214ENST00000636314 442 ntTSL 3 BASIC16.58■□□□□ 0.24
RNF103-CHMP3A0A140T963 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
RNF103-CHMP3A0A140T963 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
RNF103-CHMP3A0A140T963 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC16.58■□□□□ 0.24
RNF103-CHMP3A0A140T963 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
RNF103-CHMP3A0A140T963 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
RNF103-CHMP3A0A140T963 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
RNF103-CHMP3A0A140T963 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RNF103-CHMP3A0A140T963 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RNF103-CHMP3A0A140T963 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC16.58■□□□□ 0.24
RNF103-CHMP3A0A140T963 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
RNF103-CHMP3A0A140T963 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC16.58■□□□□ 0.24
RNF103-CHMP3A0A140T963 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
RNF103-CHMP3A0A140T963 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
RNF103-CHMP3A0A140T963 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC16.58■□□□□ 0.24
RNF103-CHMP3A0A140T963 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RNF103-CHMP3A0A140T963 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
RNF103-CHMP3A0A140T963 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
RNF103-CHMP3A0A140T963 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RNF103-CHMP3A0A140T963 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
RNF103-CHMP3A0A140T963 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC16.58■□□□□ 0.24
RNF103-CHMP3A0A140T963 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RNF103-CHMP3A0A140T963 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC16.58■□□□□ 0.24
RNF103-CHMP3A0A140T963 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
RNF103-CHMP3A0A140T963 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RNF103-CHMP3A0A140T963 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RNF103-CHMP3A0A140T963 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RNF103-CHMP3A0A140T963 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC16.57■□□□□ 0.24
RNF103-CHMP3A0A140T963 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RNF103-CHMP3A0A140T963 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RNF103-CHMP3A0A140T963 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC16.57■□□□□ 0.24
RNF103-CHMP3A0A140T963 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RNF103-CHMP3A0A140T963 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC16.57■□□□□ 0.24
RNF103-CHMP3A0A140T963 ADM-208ENST00000534464 1640 ntTSL 2 BASIC16.57■□□□□ 0.24
RNF103-CHMP3A0A140T963 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RNF103-CHMP3A0A140T963 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
RNF103-CHMP3A0A140T963 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC16.57■□□□□ 0.24
RNF103-CHMP3A0A140T963 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
RNF103-CHMP3A0A140T963 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
RNF103-CHMP3A0A140T963 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
RNF103-CHMP3A0A140T963 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
RNF103-CHMP3A0A140T963 AL671277.2-201ENST00000458060 996 ntBASIC16.57■□□□□ 0.24
RNF103-CHMP3A0A140T963 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC16.57■□□□□ 0.24
RNF103-CHMP3A0A140T963 LY6E-213ENST00000522528 606 ntTSL 3 BASIC16.57■□□□□ 0.24
RNF103-CHMP3A0A140T963 AC022616.7-201ENST00000525383 220 ntBASIC16.57■□□□□ 0.24
RNF103-CHMP3A0A140T963 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC16.57■□□□□ 0.24
RNF103-CHMP3A0A140T963 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC16.57■□□□□ 0.24
RNF103-CHMP3A0A140T963 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
RNF103-CHMP3A0A140T963 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RNF103-CHMP3A0A140T963 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
RNF103-CHMP3A0A140T963 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RNF103-CHMP3A0A140T963 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RNF103-CHMP3A0A140T963 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RNF103-CHMP3A0A140T963 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
RNF103-CHMP3A0A140T963 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
RNF103-CHMP3A0A140T963 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC16.57■□□□□ 0.24
RNF103-CHMP3A0A140T963 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
RNF103-CHMP3A0A140T963 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RNF103-CHMP3A0A140T963 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC16.57■□□□□ 0.24
RNF103-CHMP3A0A140T963 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC16.57■□□□□ 0.24
RNF103-CHMP3A0A140T963 LYSMD4-203ENST00000378904 2122 ntBASIC16.57■□□□□ 0.24
RNF103-CHMP3A0A140T963 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RNF103-CHMP3A0A140T963 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
RNF103-CHMP3A0A140T963 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RNF103-CHMP3A0A140T963 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
RNF103-CHMP3A0A140T963 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RNF103-CHMP3A0A140T963 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
RNF103-CHMP3A0A140T963 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
RNF103-CHMP3A0A140T963 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
RNF103-CHMP3A0A140T963 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms