Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 SPDYE21P-201ENST00000413323 827 ntBASIC17.17■□□□□ 0.34
PCDHB1Q9Y5F3 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
PCDHB1Q9Y5F3 URGCP-206ENST00000446958 365 ntTSL 2 BASIC17.17■□□□□ 0.34
PCDHB1Q9Y5F3 AC004967.1-201ENST00000453589 447 ntBASIC17.17■□□□□ 0.34
PCDHB1Q9Y5F3 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC17.17■□□□□ 0.34
PCDHB1Q9Y5F3 AC105339.3-201ENST00000560043 636 ntBASIC17.17■□□□□ 0.34
PCDHB1Q9Y5F3 AC040169.1-201ENST00000565382 521 ntBASIC17.17■□□□□ 0.34
PCDHB1Q9Y5F3 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PCDHB1Q9Y5F3 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PCDHB1Q9Y5F3 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC17.17■□□□□ 0.34
PCDHB1Q9Y5F3 LINC02012-201ENST00000608206 1725 ntBASIC17.17■□□□□ 0.34
PCDHB1Q9Y5F3 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
PCDHB1Q9Y5F3 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PCDHB1Q9Y5F3 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
PCDHB1Q9Y5F3 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC17.17■□□□□ 0.34
PCDHB1Q9Y5F3 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
PCDHB1Q9Y5F3 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PCDHB1Q9Y5F3 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
PCDHB1Q9Y5F3 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
PCDHB1Q9Y5F3 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
PCDHB1Q9Y5F3 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PCDHB1Q9Y5F3 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
PCDHB1Q9Y5F3 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCDHB1Q9Y5F3 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCDHB1Q9Y5F3 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC17.16■□□□□ 0.34
PCDHB1Q9Y5F3 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC17.16■□□□□ 0.34
PCDHB1Q9Y5F3 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCDHB1Q9Y5F3 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCDHB1Q9Y5F3 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCDHB1Q9Y5F3 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCDHB1Q9Y5F3 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC17.16■□□□□ 0.34
PCDHB1Q9Y5F3 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PCDHB1Q9Y5F3 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCDHB1Q9Y5F3 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCDHB1Q9Y5F3 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC17.16■□□□□ 0.34
PCDHB1Q9Y5F3 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC17.16■□□□□ 0.34
PCDHB1Q9Y5F3 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC17.16■□□□□ 0.34
PCDHB1Q9Y5F3 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PCDHB1Q9Y5F3 AC107918.4-202ENST00000641623 219 ntBASIC17.16■□□□□ 0.34
PCDHB1Q9Y5F3 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCDHB1Q9Y5F3 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCDHB1Q9Y5F3 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC17.16■□□□□ 0.34
PCDHB1Q9Y5F3 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCDHB1Q9Y5F3 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC17.16■□□□□ 0.34
PCDHB1Q9Y5F3 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PCDHB1Q9Y5F3 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCDHB1Q9Y5F3 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCDHB1Q9Y5F3 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PCDHB1Q9Y5F3 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PCDHB1Q9Y5F3 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PCDHB1Q9Y5F3 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PCDHB1Q9Y5F3 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
PCDHB1Q9Y5F3 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
PCDHB1Q9Y5F3 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC17.15■□□□□ 0.34
PCDHB1Q9Y5F3 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PCDHB1Q9Y5F3 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
PCDHB1Q9Y5F3 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
PCDHB1Q9Y5F3 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
PCDHB1Q9Y5F3 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PCDHB1Q9Y5F3 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
PCDHB1Q9Y5F3 AL121761.2-201ENST00000598007 1648 ntBASIC17.15■□□□□ 0.34
PCDHB1Q9Y5F3 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC17.15■□□□□ 0.34
PCDHB1Q9Y5F3 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
PCDHB1Q9Y5F3 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
PCDHB1Q9Y5F3 DNAJB3-201ENST00000446806 729 ntBASIC17.15■□□□□ 0.34
PCDHB1Q9Y5F3 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
PCDHB1Q9Y5F3 RNA5SP416-201ENST00000516838 111 ntBASIC17.15■□□□□ 0.34
PCDHB1Q9Y5F3 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
PCDHB1Q9Y5F3 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC17.15■□□□□ 0.34
PCDHB1Q9Y5F3 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC17.15■□□□□ 0.34
PCDHB1Q9Y5F3 AC073592.4-201ENST00000623827 446 ntBASIC17.15■□□□□ 0.34
PCDHB1Q9Y5F3 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
PCDHB1Q9Y5F3 AC134684.3-201ENST00000641758 218 ntBASIC17.15■□□□□ 0.34
PCDHB1Q9Y5F3 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PCDHB1Q9Y5F3 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
PCDHB1Q9Y5F3 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC17.15■□□□□ 0.34
PCDHB1Q9Y5F3 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
PCDHB1Q9Y5F3 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC17.15■□□□□ 0.34
PCDHB1Q9Y5F3 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PCDHB1Q9Y5F3 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
PCDHB1Q9Y5F3 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC17.15■□□□□ 0.34
PCDHB1Q9Y5F3 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PCDHB1Q9Y5F3 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
PCDHB1Q9Y5F3 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PCDHB1Q9Y5F3 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC17.15■□□□□ 0.34
PCDHB1Q9Y5F3 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PCDHB1Q9Y5F3 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
PCDHB1Q9Y5F3 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PCDHB1Q9Y5F3 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PCDHB1Q9Y5F3 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.34
PCDHB1Q9Y5F3 AC079776.2-201ENST00000641154 1609 ntBASIC17.14■□□□□ 0.33
PCDHB1Q9Y5F3 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PCDHB1Q9Y5F3 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC17.14■□□□□ 0.33
PCDHB1Q9Y5F3 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PCDHB1Q9Y5F3 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCDHB1Q9Y5F3 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
PCDHB1Q9Y5F3 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PCDHB1Q9Y5F3 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC17.14■□□□□ 0.33
PCDHB1Q9Y5F3 PMP22-202ENST00000395936 816 ntTSL 3 BASIC17.14■□□□□ 0.33
PCDHB1Q9Y5F3 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC17.14■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms