Protein–RNA interactions for Protein: Q9BYR8

KRTAP3-1, Keratin-associated protein 3-1, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-1Q9BYR8 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
KRTAP3-1Q9BYR8 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
KRTAP3-1Q9BYR8 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
KRTAP3-1Q9BYR8 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC8.74□□□□□ -1.01
KRTAP3-1Q9BYR8 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
KRTAP3-1Q9BYR8 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC8.74□□□□□ -1.01
KRTAP3-1Q9BYR8 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC8.74□□□□□ -1.01
KRTAP3-1Q9BYR8 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
KRTAP3-1Q9BYR8 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC8.73□□□□□ -1.01
KRTAP3-1Q9BYR8 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
KRTAP3-1Q9BYR8 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC8.73□□□□□ -1.01
KRTAP3-1Q9BYR8 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
KRTAP3-1Q9BYR8 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
KRTAP3-1Q9BYR8 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC8.73□□□□□ -1.01
KRTAP3-1Q9BYR8 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC8.73□□□□□ -1.01
KRTAP3-1Q9BYR8 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC8.73□□□□□ -1.01
KRTAP3-1Q9BYR8 AC103702.1-201ENST00000548801 2630 ntBASIC8.73□□□□□ -1.01
KRTAP3-1Q9BYR8 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC8.73□□□□□ -1.01
KRTAP3-1Q9BYR8 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC8.73□□□□□ -1.01
KRTAP3-1Q9BYR8 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
KRTAP3-1Q9BYR8 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC8.73□□□□□ -1.01
KRTAP3-1Q9BYR8 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC8.73□□□□□ -1.01
KRTAP3-1Q9BYR8 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
KRTAP3-1Q9BYR8 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC8.73□□□□□ -1.01
KRTAP3-1Q9BYR8 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC8.73□□□□□ -1.01
KRTAP3-1Q9BYR8 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC8.73□□□□□ -1.01
KRTAP3-1Q9BYR8 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC8.73□□□□□ -1.01
KRTAP3-1Q9BYR8 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC8.73□□□□□ -1.01
KRTAP3-1Q9BYR8 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC8.73□□□□□ -1.01
KRTAP3-1Q9BYR8 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
KRTAP3-1Q9BYR8 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC8.73□□□□□ -1.01
KRTAP3-1Q9BYR8 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC8.73□□□□□ -1.01
KRTAP3-1Q9BYR8 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
KRTAP3-1Q9BYR8 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
KRTAP3-1Q9BYR8 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC8.73□□□□□ -1.01
KRTAP3-1Q9BYR8 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
KRTAP3-1Q9BYR8 STARP1-201ENST00000397973 869 ntBASIC8.73□□□□□ -1.01
KRTAP3-1Q9BYR8 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC8.73□□□□□ -1.01
KRTAP3-1Q9BYR8 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC8.73□□□□□ -1.01
KRTAP3-1Q9BYR8 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC8.73□□□□□ -1.01
KRTAP3-1Q9BYR8 SLC25A3P1-201ENST00000443844 931 ntBASIC8.73□□□□□ -1.01
KRTAP3-1Q9BYR8 RSL24D1P2-201ENST00000445584 366 ntBASIC8.73□□□□□ -1.01
KRTAP3-1Q9BYR8 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC8.73□□□□□ -1.01
KRTAP3-1Q9BYR8 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC8.73□□□□□ -1.01
KRTAP3-1Q9BYR8 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC8.73□□□□□ -1.01
KRTAP3-1Q9BYR8 AC069234.2-201ENST00000541383 575 ntTSL 3 BASIC8.73□□□□□ -1.01
KRTAP3-1Q9BYR8 ZNF444P1-201ENST00000559497 298 ntBASIC8.73□□□□□ -1.01
KRTAP3-1Q9BYR8 RNF126P1-202ENST00000569893 925 ntBASIC8.73□□□□□ -1.01
KRTAP3-1Q9BYR8 STK25P1-201ENST00000585406 838 ntBASIC8.73□□□□□ -1.01
KRTAP3-1Q9BYR8 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
KRTAP3-1Q9BYR8 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC8.73□□□□□ -1.01
KRTAP3-1Q9BYR8 AC008543.3-201ENST00000586983 491 ntTSL 5 BASIC8.73□□□□□ -1.01
KRTAP3-1Q9BYR8 AC004223.2-201ENST00000590309 544 ntBASIC8.73□□□□□ -1.01
KRTAP3-1Q9BYR8 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC8.73□□□□□ -1.01
KRTAP3-1Q9BYR8 CSNK1A1-209ENST00000606299 1075 ntTSL 3 BASIC8.73□□□□□ -1.01
KRTAP3-1Q9BYR8 MAP3K14-205ENST00000617331 1049 ntTSL 5 BASIC8.73□□□□□ -1.01
KRTAP3-1Q9BYR8 SMIM11B-202ENST00000619874 843 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
KRTAP3-1Q9BYR8 AC011558.1-201ENST00000623459 338 ntBASIC8.73□□□□□ -1.01
KRTAP3-1Q9BYR8 CLN6-221ENST00000637494 765 ntTSL 5 BASIC8.73□□□□□ -1.01
KRTAP3-1Q9BYR8 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC8.73□□□□□ -1.01
KRTAP3-1Q9BYR8 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
KRTAP3-1Q9BYR8 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
KRTAP3-1Q9BYR8 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC8.73□□□□□ -1.01
KRTAP3-1Q9BYR8 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC8.73□□□□□ -1.01
KRTAP3-1Q9BYR8 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
KRTAP3-1Q9BYR8 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC8.73□□□□□ -1.01
KRTAP3-1Q9BYR8 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC8.73□□□□□ -1.01
KRTAP3-1Q9BYR8 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC8.73□□□□□ -1.01
KRTAP3-1Q9BYR8 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
KRTAP3-1Q9BYR8 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC8.73□□□□□ -1.01
KRTAP3-1Q9BYR8 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC8.73□□□□□ -1.01
KRTAP3-1Q9BYR8 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC8.73□□□□□ -1.01
KRTAP3-1Q9BYR8 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC8.73□□□□□ -1.01
KRTAP3-1Q9BYR8 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC8.73□□□□□ -1.01
KRTAP3-1Q9BYR8 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
KRTAP3-1Q9BYR8 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
KRTAP3-1Q9BYR8 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC8.73□□□□□ -1.01
KRTAP3-1Q9BYR8 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC8.73□□□□□ -1.01
KRTAP3-1Q9BYR8 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC8.73□□□□□ -1.01
KRTAP3-1Q9BYR8 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC8.73□□□□□ -1.01
KRTAP3-1Q9BYR8 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC8.73□□□□□ -1.01
KRTAP3-1Q9BYR8 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
KRTAP3-1Q9BYR8 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC8.73□□□□□ -1.01
KRTAP3-1Q9BYR8 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC8.73□□□□□ -1.01
KRTAP3-1Q9BYR8 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
KRTAP3-1Q9BYR8 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC8.72□□□□□ -1.01
KRTAP3-1Q9BYR8 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC8.72□□□□□ -1.01
KRTAP3-1Q9BYR8 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
KRTAP3-1Q9BYR8 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC8.72□□□□□ -1.01
KRTAP3-1Q9BYR8 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
KRTAP3-1Q9BYR8 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC8.72□□□□□ -1.01
KRTAP3-1Q9BYR8 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
KRTAP3-1Q9BYR8 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC8.72□□□□□ -1.01
KRTAP3-1Q9BYR8 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
KRTAP3-1Q9BYR8 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC8.72□□□□□ -1.01
KRTAP3-1Q9BYR8 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC8.72□□□□□ -1.01
KRTAP3-1Q9BYR8 GCK-202ENST00000345378 2421 ntTSL 2 BASIC8.72□□□□□ -1.01
KRTAP3-1Q9BYR8 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
KRTAP3-1Q9BYR8 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
KRTAP3-1Q9BYR8 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms