Protein–RNA interactions for Protein: Q9BYE3

LCE3D, Late cornified envelope protein 3D, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCE3DQ9BYE3 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
LCE3DQ9BYE3 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC4.65□□□□□ -1.67
LCE3DQ9BYE3 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC4.65□□□□□ -1.67
LCE3DQ9BYE3 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC4.65□□□□□ -1.67
LCE3DQ9BYE3 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC4.65□□□□□ -1.67
LCE3DQ9BYE3 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC4.65□□□□□ -1.67
LCE3DQ9BYE3 CLCN6-201ENST00000312413 5631 ntTSL 2 BASIC4.65□□□□□ -1.67
LCE3DQ9BYE3 SLC9A8-201ENST00000361573 6094 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
LCE3DQ9BYE3 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
LCE3DQ9BYE3 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC4.65□□□□□ -1.67
LCE3DQ9BYE3 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
LCE3DQ9BYE3 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
LCE3DQ9BYE3 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
LCE3DQ9BYE3 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC4.65□□□□□ -1.67
LCE3DQ9BYE3 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
LCE3DQ9BYE3 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC4.65□□□□□ -1.67
LCE3DQ9BYE3 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
LCE3DQ9BYE3 MPLKIP-201ENST00000306984 7668 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
LCE3DQ9BYE3 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC4.65□□□□□ -1.67
LCE3DQ9BYE3 KLHL9-201ENST00000359039 5710 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
LCE3DQ9BYE3 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
LCE3DQ9BYE3 RAP2B-201ENST00000323534 8351 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
LCE3DQ9BYE3 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC4.65□□□□□ -1.67
LCE3DQ9BYE3 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC4.65□□□□□ -1.67
LCE3DQ9BYE3 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
LCE3DQ9BYE3 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.67
LCE3DQ9BYE3 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC4.65□□□□□ -1.67
LCE3DQ9BYE3 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
LCE3DQ9BYE3 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
LCE3DQ9BYE3 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
LCE3DQ9BYE3 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC4.65□□□□□ -1.67
LCE3DQ9BYE3 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.67
LCE3DQ9BYE3 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC4.65□□□□□ -1.67
LCE3DQ9BYE3 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC4.65□□□□□ -1.67
LCE3DQ9BYE3 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
LCE3DQ9BYE3 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
LCE3DQ9BYE3 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC4.65□□□□□ -1.67
LCE3DQ9BYE3 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC4.65□□□□□ -1.67
LCE3DQ9BYE3 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC4.65□□□□□ -1.67
LCE3DQ9BYE3 AL731571.1-201ENST00000617058 5428 ntBASIC4.65□□□□□ -1.67
LCE3DQ9BYE3 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.67
LCE3DQ9BYE3 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC4.65□□□□□ -1.67
LCE3DQ9BYE3 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
LCE3DQ9BYE3 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
LCE3DQ9BYE3 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
LCE3DQ9BYE3 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC4.65□□□□□ -1.67
LCE3DQ9BYE3 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC4.65□□□□□ -1.67
LCE3DQ9BYE3 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
LCE3DQ9BYE3 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.67
LCE3DQ9BYE3 FASN-201ENST00000306749 8565 ntAPPRIS P2 TSL 1 (best) BASIC4.65□□□□□ -1.67
LCE3DQ9BYE3 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC4.64□□□□□ -1.67
LCE3DQ9BYE3 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC4.64□□□□□ -1.67
LCE3DQ9BYE3 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC4.64□□□□□ -1.67
LCE3DQ9BYE3 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC4.64□□□□□ -1.67
LCE3DQ9BYE3 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
LCE3DQ9BYE3 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
LCE3DQ9BYE3 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
LCE3DQ9BYE3 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
LCE3DQ9BYE3 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
LCE3DQ9BYE3 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
LCE3DQ9BYE3 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
LCE3DQ9BYE3 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC4.64□□□□□ -1.67
LCE3DQ9BYE3 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
LCE3DQ9BYE3 NCOR2-202ENST00000404121 7175 ntTSL 5 BASIC4.64□□□□□ -1.67
LCE3DQ9BYE3 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC4.64□□□□□ -1.67
LCE3DQ9BYE3 AC132938.6-201ENST00000623828 1655 ntBASIC4.64□□□□□ -1.67
LCE3DQ9BYE3 DCHS1-201ENST00000299441 10765 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
LCE3DQ9BYE3 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
LCE3DQ9BYE3 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC4.64□□□□□ -1.67
LCE3DQ9BYE3 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC4.64□□□□□ -1.67
LCE3DQ9BYE3 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC4.64□□□□□ -1.67
LCE3DQ9BYE3 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC4.64□□□□□ -1.67
LCE3DQ9BYE3 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC4.64□□□□□ -1.67
LCE3DQ9BYE3 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC4.64□□□□□ -1.67
LCE3DQ9BYE3 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
LCE3DQ9BYE3 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC4.64□□□□□ -1.67
LCE3DQ9BYE3 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
LCE3DQ9BYE3 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
LCE3DQ9BYE3 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
LCE3DQ9BYE3 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC4.64□□□□□ -1.67
LCE3DQ9BYE3 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
LCE3DQ9BYE3 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
LCE3DQ9BYE3 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
LCE3DQ9BYE3 KCNG4-201ENST00000308251 5179 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
LCE3DQ9BYE3 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
LCE3DQ9BYE3 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC4.64□□□□□ -1.67
LCE3DQ9BYE3 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC4.64□□□□□ -1.67
LCE3DQ9BYE3 LINC02012-201ENST00000608206 1725 ntBASIC4.64□□□□□ -1.67
LCE3DQ9BYE3 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
LCE3DQ9BYE3 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
LCE3DQ9BYE3 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC4.64□□□□□ -1.67
LCE3DQ9BYE3 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
LCE3DQ9BYE3 AC005052.1-201ENST00000625181 2492 ntBASIC4.64□□□□□ -1.67
LCE3DQ9BYE3 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
LCE3DQ9BYE3 ALX4-201ENST00000329255 5750 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
LCE3DQ9BYE3 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC4.64□□□□□ -1.67
LCE3DQ9BYE3 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
LCE3DQ9BYE3 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC4.64□□□□□ -1.67
LCE3DQ9BYE3 TOM1L2-214ENST00000581396 5595 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
LCE3DQ9BYE3 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms