Protein–RNA interactions for Protein: Q96L12

CALR3, Calreticulin-3, humanhuman

Known RBP Predictions only

Length 384 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALR3Q96L12 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CALR3Q96L12 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC18.18■□□□□ 0.5
CALR3Q96L12 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CALR3Q96L12 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
CALR3Q96L12 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CALR3Q96L12 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
CALR3Q96L12 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC18.18■□□□□ 0.5
CALR3Q96L12 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC18.18■□□□□ 0.5
CALR3Q96L12 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC18.18■□□□□ 0.5
CALR3Q96L12 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC18.18■□□□□ 0.5
CALR3Q96L12 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CALR3Q96L12 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC18.17■□□□□ 0.5
CALR3Q96L12 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC18.17■□□□□ 0.5
CALR3Q96L12 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
CALR3Q96L12 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CALR3Q96L12 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CALR3Q96L12 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
CALR3Q96L12 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC18.17■□□□□ 0.5
CALR3Q96L12 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CALR3Q96L12 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CALR3Q96L12 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC18.17■□□□□ 0.5
CALR3Q96L12 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CALR3Q96L12 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CALR3Q96L12 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC18.17■□□□□ 0.5
CALR3Q96L12 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
CALR3Q96L12 AC132938.5-201ENST00000624980 1813 ntBASIC18.17■□□□□ 0.5
CALR3Q96L12 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
CALR3Q96L12 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CALR3Q96L12 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CALR3Q96L12 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CALR3Q96L12 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CALR3Q96L12 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
CALR3Q96L12 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC18.17■□□□□ 0.5
CALR3Q96L12 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC18.17■□□□□ 0.5
CALR3Q96L12 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CALR3Q96L12 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC18.17■□□□□ 0.5
CALR3Q96L12 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC18.17■□□□□ 0.5
CALR3Q96L12 RBM42-202ENST00000586618 771 ntTSL 3 BASIC18.17■□□□□ 0.5
CALR3Q96L12 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC18.17■□□□□ 0.5
CALR3Q96L12 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CALR3Q96L12 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CALR3Q96L12 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
CALR3Q96L12 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
CALR3Q96L12 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CALR3Q96L12 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
CALR3Q96L12 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CALR3Q96L12 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC18.17■□□□□ 0.5
CALR3Q96L12 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
CALR3Q96L12 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
CALR3Q96L12 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CALR3Q96L12 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CALR3Q96L12 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC18.16■□□□□ 0.5
CALR3Q96L12 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
CALR3Q96L12 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CALR3Q96L12 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC18.16■□□□□ 0.5
CALR3Q96L12 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC18.16■□□□□ 0.5
CALR3Q96L12 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CALR3Q96L12 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC18.16■□□□□ 0.5
CALR3Q96L12 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CALR3Q96L12 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CALR3Q96L12 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CALR3Q96L12 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CALR3Q96L12 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CALR3Q96L12 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC18.16■□□□□ 0.5
CALR3Q96L12 ACTG1P4-201ENST00000425123 1122 ntBASIC18.16■□□□□ 0.5
CALR3Q96L12 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
CALR3Q96L12 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
CALR3Q96L12 PPOX-219ENST00000544598 813 ntTSL 2 BASIC18.16■□□□□ 0.5
CALR3Q96L12 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
CALR3Q96L12 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
CALR3Q96L12 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
CALR3Q96L12 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC18.16■□□□□ 0.5
CALR3Q96L12 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CALR3Q96L12 AC026691.1-201ENST00000602502 2017 ntBASIC18.16■□□□□ 0.5
CALR3Q96L12 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC18.16■□□□□ 0.5
CALR3Q96L12 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CALR3Q96L12 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CALR3Q96L12 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CALR3Q96L12 AC006449.5-201ENST00000610658 2098 ntBASIC18.16■□□□□ 0.5
CALR3Q96L12 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CALR3Q96L12 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CALR3Q96L12 AC103702.1-201ENST00000548801 2630 ntBASIC18.16■□□□□ 0.5
CALR3Q96L12 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC18.15■□□□□ 0.5
CALR3Q96L12 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC18.15■□□□□ 0.5
CALR3Q96L12 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CALR3Q96L12 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC18.15■□□□□ 0.5
CALR3Q96L12 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CALR3Q96L12 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CALR3Q96L12 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC18.15■□□□□ 0.5
CALR3Q96L12 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC18.15■□□□□ 0.5
CALR3Q96L12 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
CALR3Q96L12 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CALR3Q96L12 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CALR3Q96L12 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC18.15■□□□□ 0.5
CALR3Q96L12 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
CALR3Q96L12 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CALR3Q96L12 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC18.15■□□□□ 0.5
CALR3Q96L12 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC18.15■□□□□ 0.5
CALR3Q96L12 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CALR3Q96L12 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms