Protein–RNA interactions for Protein: Q969H4

CNKSR1, Connector enhancer of kinase suppressor of ras 1, humanhuman

Predictions only

Length 720 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1Q969H4 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC20.8■□□□□ 0.92
CNKSR1Q969H4 AP3S2-216ENST00000617003 1561 ntBASIC20.8■□□□□ 0.92
CNKSR1Q969H4 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
CNKSR1Q969H4 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CNKSR1Q969H4 NARF-206ENST00000457415 1668 ntTSL 5 BASIC20.8■□□□□ 0.92
CNKSR1Q969H4 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC20.8■□□□□ 0.92
CNKSR1Q969H4 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CNKSR1Q969H4 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC20.79■□□□□ 0.92
CNKSR1Q969H4 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CNKSR1Q969H4 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CNKSR1Q969H4 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CNKSR1Q969H4 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CNKSR1Q969H4 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CNKSR1Q969H4 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CNKSR1Q969H4 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CNKSR1Q969H4 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CNKSR1Q969H4 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC20.79■□□□□ 0.92
CNKSR1Q969H4 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
CNKSR1Q969H4 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
CNKSR1Q969H4 AC138028.4-201ENST00000564984 1845 ntBASIC20.79■□□□□ 0.92
CNKSR1Q969H4 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
CNKSR1Q969H4 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
CNKSR1Q969H4 ARSEP1-201ENST00000420443 635 ntBASIC20.79■□□□□ 0.92
CNKSR1Q969H4 AC105233.2-201ENST00000523697 349 ntBASIC20.79■□□□□ 0.92
CNKSR1Q969H4 AF228730.5-201ENST00000530288 346 ntBASIC20.79■□□□□ 0.92
CNKSR1Q969H4 SSH2-210ENST00000582084 560 ntTSL 3 BASIC20.79■□□□□ 0.92
CNKSR1Q969H4 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC20.79■□□□□ 0.92
CNKSR1Q969H4 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
CNKSR1Q969H4 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
CNKSR1Q969H4 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CNKSR1Q969H4 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CNKSR1Q969H4 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CNKSR1Q969H4 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC20.79■□□□□ 0.92
CNKSR1Q969H4 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC20.79■□□□□ 0.92
CNKSR1Q969H4 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CNKSR1Q969H4 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CNKSR1Q969H4 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC20.78■□□□□ 0.92
CNKSR1Q969H4 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CNKSR1Q969H4 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
CNKSR1Q969H4 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC20.78■□□□□ 0.92
CNKSR1Q969H4 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CNKSR1Q969H4 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CNKSR1Q969H4 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC20.78■□□□□ 0.92
CNKSR1Q969H4 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CNKSR1Q969H4 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
CNKSR1Q969H4 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CNKSR1Q969H4 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CNKSR1Q969H4 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CNKSR1Q969H4 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CNKSR1Q969H4 LINC00304-203ENST00000565008 1864 ntBASIC20.78■□□□□ 0.92
CNKSR1Q969H4 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC20.78■□□□□ 0.92
CNKSR1Q969H4 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CNKSR1Q969H4 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC20.78■□□□□ 0.92
CNKSR1Q969H4 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CNKSR1Q969H4 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC20.78■□□□□ 0.92
CNKSR1Q969H4 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC20.78■□□□□ 0.92
CNKSR1Q969H4 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC20.78■□□□□ 0.92
CNKSR1Q969H4 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC20.78■□□□□ 0.92
CNKSR1Q969H4 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC20.78■□□□□ 0.92
CNKSR1Q969H4 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC20.78■□□□□ 0.92
CNKSR1Q969H4 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC20.78■□□□□ 0.92
CNKSR1Q969H4 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC20.78■□□□□ 0.92
CNKSR1Q969H4 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC20.78■□□□□ 0.92
CNKSR1Q969H4 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CNKSR1Q969H4 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
CNKSR1Q969H4 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CNKSR1Q969H4 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CNKSR1Q969H4 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC20.78■□□□□ 0.92
CNKSR1Q969H4 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC20.78■□□□□ 0.92
CNKSR1Q969H4 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
CNKSR1Q969H4 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC20.78■□□□□ 0.92
CNKSR1Q969H4 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
CNKSR1Q969H4 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
CNKSR1Q969H4 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
CNKSR1Q969H4 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
CNKSR1Q969H4 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
CNKSR1Q969H4 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CNKSR1Q969H4 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
CNKSR1Q969H4 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC20.77■□□□□ 0.92
CNKSR1Q969H4 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CNKSR1Q969H4 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CNKSR1Q969H4 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
CNKSR1Q969H4 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
CNKSR1Q969H4 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
CNKSR1Q969H4 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC20.77■□□□□ 0.92
CNKSR1Q969H4 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
CNKSR1Q969H4 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CNKSR1Q969H4 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
CNKSR1Q969H4 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CNKSR1Q969H4 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CNKSR1Q969H4 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
CNKSR1Q969H4 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CNKSR1Q969H4 SATB1-217ENST00000493952 626 ntTSL 3 BASIC20.77■□□□□ 0.92
CNKSR1Q969H4 CDK4-206ENST00000549606 558 ntTSL 2 BASIC20.77■□□□□ 0.92
CNKSR1Q969H4 TP53TG3HP-202ENST00000569755 579 ntBASIC20.77■□□□□ 0.92
CNKSR1Q969H4 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CNKSR1Q969H4 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
CNKSR1Q969H4 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC20.77■□□□□ 0.92
CNKSR1Q969H4 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CNKSR1Q969H4 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC20.77■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms