Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC17.22■□□□□ 0.35
SLC44A1Q8WWI5 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SLC44A1Q8WWI5 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SLC44A1Q8WWI5 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SLC44A1Q8WWI5 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC17.22■□□□□ 0.35
SLC44A1Q8WWI5 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
SLC44A1Q8WWI5 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC17.22■□□□□ 0.35
SLC44A1Q8WWI5 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC17.22■□□□□ 0.35
SLC44A1Q8WWI5 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SLC44A1Q8WWI5 TUBB8P12-201ENST00000308911 1335 ntBASIC17.21■□□□□ 0.35
SLC44A1Q8WWI5 TUBB7P-202ENST00000428444 1305 ntBASIC17.21■□□□□ 0.35
SLC44A1Q8WWI5 TUBB8P7-204ENST00000567960 1332 ntBASIC17.21■□□□□ 0.35
SLC44A1Q8WWI5 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SLC44A1Q8WWI5 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
SLC44A1Q8WWI5 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
SLC44A1Q8WWI5 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SLC44A1Q8WWI5 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SLC44A1Q8WWI5 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
SLC44A1Q8WWI5 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC17.21■□□□□ 0.35
SLC44A1Q8WWI5 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SLC44A1Q8WWI5 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC17.21■□□□□ 0.35
SLC44A1Q8WWI5 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SLC44A1Q8WWI5 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SLC44A1Q8WWI5 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC17.21■□□□□ 0.35
SLC44A1Q8WWI5 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC17.21■□□□□ 0.35
SLC44A1Q8WWI5 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
SLC44A1Q8WWI5 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
SLC44A1Q8WWI5 AL391256.1-201ENST00000443260 1855 ntBASIC17.21■□□□□ 0.35
SLC44A1Q8WWI5 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
SLC44A1Q8WWI5 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC17.21■□□□□ 0.35
SLC44A1Q8WWI5 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC17.21■□□□□ 0.35
SLC44A1Q8WWI5 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SLC44A1Q8WWI5 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
SLC44A1Q8WWI5 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
SLC44A1Q8WWI5 CD9-202ENST00000382515 1229 ntTSL 5 BASIC17.21■□□□□ 0.35
SLC44A1Q8WWI5 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
SLC44A1Q8WWI5 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC17.21■□□□□ 0.35
SLC44A1Q8WWI5 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC17.21■□□□□ 0.35
SLC44A1Q8WWI5 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SLC44A1Q8WWI5 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC17.21■□□□□ 0.35
SLC44A1Q8WWI5 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC17.21■□□□□ 0.35
SLC44A1Q8WWI5 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC17.21■□□□□ 0.35
SLC44A1Q8WWI5 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC17.21■□□□□ 0.35
SLC44A1Q8WWI5 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC17.21■□□□□ 0.35
SLC44A1Q8WWI5 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC17.21■□□□□ 0.35
SLC44A1Q8WWI5 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC17.21■□□□□ 0.35
SLC44A1Q8WWI5 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
SLC44A1Q8WWI5 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SLC44A1Q8WWI5 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
SLC44A1Q8WWI5 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC17.21■□□□□ 0.35
SLC44A1Q8WWI5 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SLC44A1Q8WWI5 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC17.21■□□□□ 0.35
SLC44A1Q8WWI5 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.34
SLC44A1Q8WWI5 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC17.21■□□□□ 0.34
SLC44A1Q8WWI5 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.34
SLC44A1Q8WWI5 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.34
SLC44A1Q8WWI5 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC17.21■□□□□ 0.34
SLC44A1Q8WWI5 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
SLC44A1Q8WWI5 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
SLC44A1Q8WWI5 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SLC44A1Q8WWI5 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
SLC44A1Q8WWI5 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC17.2■□□□□ 0.34
SLC44A1Q8WWI5 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SLC44A1Q8WWI5 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC17.2■□□□□ 0.34
SLC44A1Q8WWI5 AGK-211ENST00000629555 2765 ntTSL 5 BASIC17.2■□□□□ 0.34
SLC44A1Q8WWI5 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC17.2■□□□□ 0.34
SLC44A1Q8WWI5 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC17.2■□□□□ 0.34
SLC44A1Q8WWI5 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SLC44A1Q8WWI5 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC17.2■□□□□ 0.34
SLC44A1Q8WWI5 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
SLC44A1Q8WWI5 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC17.2■□□□□ 0.34
SLC44A1Q8WWI5 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC17.2■□□□□ 0.34
SLC44A1Q8WWI5 KLF4P1-201ENST00000412782 1185 ntBASIC17.2■□□□□ 0.34
SLC44A1Q8WWI5 AC246785.2-201ENST00000432512 513 ntBASIC17.2■□□□□ 0.34
SLC44A1Q8WWI5 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC17.2■□□□□ 0.34
SLC44A1Q8WWI5 AC063952.2-201ENST00000498792 1227 ntBASIC17.2■□□□□ 0.34
SLC44A1Q8WWI5 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC17.2■□□□□ 0.34
SLC44A1Q8WWI5 AC009533.2-201ENST00000543664 586 ntBASIC17.2■□□□□ 0.34
SLC44A1Q8WWI5 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SLC44A1Q8WWI5 AC010331.1-201ENST00000611423 582 ntBASIC17.2■□□□□ 0.34
SLC44A1Q8WWI5 IGHV3-41-201ENST00000613121 348 ntBASIC17.2■□□□□ 0.34
SLC44A1Q8WWI5 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC17.2■□□□□ 0.34
SLC44A1Q8WWI5 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
SLC44A1Q8WWI5 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SLC44A1Q8WWI5 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SLC44A1Q8WWI5 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
SLC44A1Q8WWI5 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SLC44A1Q8WWI5 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SLC44A1Q8WWI5 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SLC44A1Q8WWI5 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
SLC44A1Q8WWI5 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SLC44A1Q8WWI5 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC17.2■□□□□ 0.34
SLC44A1Q8WWI5 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
SLC44A1Q8WWI5 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC17.2■□□□□ 0.34
SLC44A1Q8WWI5 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC17.2■□□□□ 0.34
SLC44A1Q8WWI5 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC17.2■□□□□ 0.34
SLC44A1Q8WWI5 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC17.19■□□□□ 0.34
SLC44A1Q8WWI5 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC17.19■□□□□ 0.34
SLC44A1Q8WWI5 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
SLC44A1Q8WWI5 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms