Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
TTC9CQ8N5M4 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
TTC9CQ8N5M4 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC13.59□□□□□ -0.23
TTC9CQ8N5M4 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC13.59□□□□□ -0.23
TTC9CQ8N5M4 TSPY19P-201ENST00000418461 509 ntBASIC13.59□□□□□ -0.23
TTC9CQ8N5M4 TSPY18P-201ENST00000441642 509 ntBASIC13.59□□□□□ -0.23
TTC9CQ8N5M4 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC13.59□□□□□ -0.23
TTC9CQ8N5M4 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC13.59□□□□□ -0.23
TTC9CQ8N5M4 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC13.59□□□□□ -0.23
TTC9CQ8N5M4 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC13.59□□□□□ -0.23
TTC9CQ8N5M4 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC13.59□□□□□ -0.23
TTC9CQ8N5M4 AC091304.2-201ENST00000564639 760 ntBASIC13.59□□□□□ -0.23
TTC9CQ8N5M4 PRELID1P1-202ENST00000567272 903 ntBASIC13.59□□□□□ -0.23
TTC9CQ8N5M4 PRR29-207ENST00000580752 458 ntTSL 3 BASIC13.59□□□□□ -0.23
TTC9CQ8N5M4 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC13.59□□□□□ -0.23
TTC9CQ8N5M4 AP001269.4-201ENST00000609611 512 ntBASIC13.59□□□□□ -0.23
TTC9CQ8N5M4 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC13.59□□□□□ -0.23
TTC9CQ8N5M4 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TTC9CQ8N5M4 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TTC9CQ8N5M4 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
TTC9CQ8N5M4 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TTC9CQ8N5M4 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC13.59□□□□□ -0.23
TTC9CQ8N5M4 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TTC9CQ8N5M4 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TTC9CQ8N5M4 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
TTC9CQ8N5M4 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
TTC9CQ8N5M4 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC13.59□□□□□ -0.23
TTC9CQ8N5M4 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC13.59□□□□□ -0.23
TTC9CQ8N5M4 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
TTC9CQ8N5M4 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
TTC9CQ8N5M4 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
TTC9CQ8N5M4 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
TTC9CQ8N5M4 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC13.59□□□□□ -0.23
TTC9CQ8N5M4 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TTC9CQ8N5M4 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC13.59□□□□□ -0.23
TTC9CQ8N5M4 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC13.59□□□□□ -0.23
TTC9CQ8N5M4 LTF-203ENST00000426532 2494 ntTSL 2 BASIC13.58□□□□□ -0.23
TTC9CQ8N5M4 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.23
TTC9CQ8N5M4 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.23
TTC9CQ8N5M4 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
TTC9CQ8N5M4 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TTC9CQ8N5M4 MST1L-201ENST00000442552 2185 ntBASIC13.58□□□□□ -0.24
TTC9CQ8N5M4 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC13.58□□□□□ -0.24
TTC9CQ8N5M4 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
TTC9CQ8N5M4 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
TTC9CQ8N5M4 AC080080.1-201ENST00000625121 2420 ntBASIC13.58□□□□□ -0.24
TTC9CQ8N5M4 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TTC9CQ8N5M4 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
TTC9CQ8N5M4 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
TTC9CQ8N5M4 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
TTC9CQ8N5M4 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
TTC9CQ8N5M4 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
TTC9CQ8N5M4 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC13.58□□□□□ -0.24
TTC9CQ8N5M4 S100A2-206ENST00000497140 697 ntTSL 2 BASIC13.58□□□□□ -0.24
TTC9CQ8N5M4 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
TTC9CQ8N5M4 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC13.58□□□□□ -0.24
TTC9CQ8N5M4 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
TTC9CQ8N5M4 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC13.58□□□□□ -0.24
TTC9CQ8N5M4 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
TTC9CQ8N5M4 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC13.58□□□□□ -0.24
TTC9CQ8N5M4 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC13.58□□□□□ -0.24
TTC9CQ8N5M4 COPE-211ENST00000600932 1144 ntTSL 5 BASIC13.58□□□□□ -0.24
TTC9CQ8N5M4 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TTC9CQ8N5M4 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC13.58□□□□□ -0.24
TTC9CQ8N5M4 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC13.58□□□□□ -0.24
TTC9CQ8N5M4 GPR89P-201ENST00000407924 1495 ntBASIC13.58□□□□□ -0.24
TTC9CQ8N5M4 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TTC9CQ8N5M4 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
TTC9CQ8N5M4 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC13.58□□□□□ -0.24
TTC9CQ8N5M4 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TTC9CQ8N5M4 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
TTC9CQ8N5M4 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
TTC9CQ8N5M4 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TTC9CQ8N5M4 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC13.58□□□□□ -0.24
TTC9CQ8N5M4 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
TTC9CQ8N5M4 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
TTC9CQ8N5M4 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TTC9CQ8N5M4 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TTC9CQ8N5M4 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
TTC9CQ8N5M4 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TTC9CQ8N5M4 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
TTC9CQ8N5M4 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TTC9CQ8N5M4 AL391005.1-201ENST00000623953 2435 ntBASIC13.58□□□□□ -0.24
TTC9CQ8N5M4 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC13.58□□□□□ -0.24
TTC9CQ8N5M4 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TTC9CQ8N5M4 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
TTC9CQ8N5M4 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC13.57□□□□□ -0.24
TTC9CQ8N5M4 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
TTC9CQ8N5M4 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
TTC9CQ8N5M4 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC13.57□□□□□ -0.24
TTC9CQ8N5M4 AC009053.2-201ENST00000563701 2365 ntBASIC13.57□□□□□ -0.24
TTC9CQ8N5M4 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TTC9CQ8N5M4 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
TTC9CQ8N5M4 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
TTC9CQ8N5M4 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
TTC9CQ8N5M4 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TTC9CQ8N5M4 LSM5-204ENST00000409909 740 ntTSL 2 BASIC13.57□□□□□ -0.24
TTC9CQ8N5M4 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC13.57□□□□□ -0.24
TTC9CQ8N5M4 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TTC9CQ8N5M4 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC13.57□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 60.8 ms