Protein–RNA interactions for Protein: Q8IWA6

CCDC60, Coiled-coil domain-containing protein 60, humanhuman

Predicted RBP Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60Q8IWA6 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC60Q8IWA6 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
CCDC60Q8IWA6 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC60Q8IWA6 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
CCDC60Q8IWA6 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC60Q8IWA6 FALEC-201ENST00000416894 566 ntTSL 3 BASIC18.99■□□□□ 0.63
CCDC60Q8IWA6 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC18.99■□□□□ 0.63
CCDC60Q8IWA6 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC18.99■□□□□ 0.63
CCDC60Q8IWA6 AP006288.1-201ENST00000446065 395 ntBASIC18.99■□□□□ 0.63
CCDC60Q8IWA6 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC18.99■□□□□ 0.63
CCDC60Q8IWA6 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
CCDC60Q8IWA6 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC18.99■□□□□ 0.63
CCDC60Q8IWA6 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC18.99■□□□□ 0.63
CCDC60Q8IWA6 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC18.99■□□□□ 0.63
CCDC60Q8IWA6 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC60Q8IWA6 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC60Q8IWA6 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC60Q8IWA6 ELL2P1-201ENST00000413990 1906 ntBASIC18.99■□□□□ 0.63
CCDC60Q8IWA6 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC60Q8IWA6 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC60Q8IWA6 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC60Q8IWA6 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC18.99■□□□□ 0.63
CCDC60Q8IWA6 AC141586.5-201ENST00000624546 2050 ntBASIC18.99■□□□□ 0.63
CCDC60Q8IWA6 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC60Q8IWA6 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC60Q8IWA6 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC60Q8IWA6 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC60Q8IWA6 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC60Q8IWA6 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC18.98■□□□□ 0.63
CCDC60Q8IWA6 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC60Q8IWA6 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC60Q8IWA6 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC60Q8IWA6 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC60Q8IWA6 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
CCDC60Q8IWA6 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
CCDC60Q8IWA6 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC60Q8IWA6 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC60Q8IWA6 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC60Q8IWA6 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC60Q8IWA6 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC18.98■□□□□ 0.63
CCDC60Q8IWA6 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC60Q8IWA6 AP002472.1-201ENST00000577490 586 ntBASIC18.98■□□□□ 0.63
CCDC60Q8IWA6 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC18.98■□□□□ 0.63
CCDC60Q8IWA6 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC18.98■□□□□ 0.63
CCDC60Q8IWA6 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
CCDC60Q8IWA6 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC60Q8IWA6 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC18.98■□□□□ 0.63
CCDC60Q8IWA6 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC18.98■□□□□ 0.63
CCDC60Q8IWA6 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
CCDC60Q8IWA6 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC18.98■□□□□ 0.63
CCDC60Q8IWA6 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC18.98■□□□□ 0.63
CCDC60Q8IWA6 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC60Q8IWA6 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC60Q8IWA6 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC60Q8IWA6 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC18.98■□□□□ 0.63
CCDC60Q8IWA6 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
CCDC60Q8IWA6 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC18.97■□□□□ 0.63
CCDC60Q8IWA6 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
CCDC60Q8IWA6 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC18.97■□□□□ 0.63
CCDC60Q8IWA6 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC60Q8IWA6 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC60Q8IWA6 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC60Q8IWA6 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC60Q8IWA6 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC18.97■□□□□ 0.63
CCDC60Q8IWA6 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC60Q8IWA6 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC18.97■□□□□ 0.63
CCDC60Q8IWA6 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC18.97■□□□□ 0.63
CCDC60Q8IWA6 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC60Q8IWA6 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC60Q8IWA6 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC18.97■□□□□ 0.63
CCDC60Q8IWA6 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC18.97■□□□□ 0.63
CCDC60Q8IWA6 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC18.97■□□□□ 0.63
CCDC60Q8IWA6 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC18.97■□□□□ 0.63
CCDC60Q8IWA6 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC18.97■□□□□ 0.63
CCDC60Q8IWA6 AC092902.6-201ENST00000641783 218 ntBASIC18.97■□□□□ 0.63
CCDC60Q8IWA6 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC60Q8IWA6 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC60Q8IWA6 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC18.97■□□□□ 0.63
CCDC60Q8IWA6 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC60Q8IWA6 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC60Q8IWA6 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC60Q8IWA6 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC60Q8IWA6 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
CCDC60Q8IWA6 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC60Q8IWA6 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC60Q8IWA6 RHBDF1P1-201ENST00000427504 1941 ntBASIC18.96■□□□□ 0.63
CCDC60Q8IWA6 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC60Q8IWA6 HCG11-201ENST00000411553 5696 ntBASIC18.96■□□□□ 0.63
CCDC60Q8IWA6 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC18.96■□□□□ 0.63
CCDC60Q8IWA6 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC60Q8IWA6 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
CCDC60Q8IWA6 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC18.96■□□□□ 0.63
CCDC60Q8IWA6 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC60Q8IWA6 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC18.96■□□□□ 0.63
CCDC60Q8IWA6 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC60Q8IWA6 CEND1P1-201ENST00000451006 455 ntBASIC18.96■□□□□ 0.63
CCDC60Q8IWA6 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC18.96■□□□□ 0.63
CCDC60Q8IWA6 CFL1-202ENST00000524553 860 ntTSL 2 BASIC18.96■□□□□ 0.63
CCDC60Q8IWA6 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC60Q8IWA6 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC18.96■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms