Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NPAS4Q8IUM7 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC18.26■□□□□ 0.51
NPAS4Q8IUM7 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
NPAS4Q8IUM7 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC18.26■□□□□ 0.51
NPAS4Q8IUM7 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
NPAS4Q8IUM7 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
NPAS4Q8IUM7 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
NPAS4Q8IUM7 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC18.26■□□□□ 0.51
NPAS4Q8IUM7 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
NPAS4Q8IUM7 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
NPAS4Q8IUM7 WT1-AS_2.1-201ENST00000613208 137 ntBASIC18.26■□□□□ 0.51
NPAS4Q8IUM7 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
NPAS4Q8IUM7 AC008267.7-201ENST00000624570 1194 ntBASIC18.26■□□□□ 0.51
NPAS4Q8IUM7 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC18.26■□□□□ 0.51
NPAS4Q8IUM7 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NPAS4Q8IUM7 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC18.26■□□□□ 0.51
NPAS4Q8IUM7 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NPAS4Q8IUM7 COMP-202ENST00000425807 2292 ntTSL 2 BASIC18.26■□□□□ 0.51
NPAS4Q8IUM7 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
NPAS4Q8IUM7 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
NPAS4Q8IUM7 FO538757.1-201ENST00000623083 1397 ntBASIC18.26■□□□□ 0.51
NPAS4Q8IUM7 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
NPAS4Q8IUM7 HCG11-201ENST00000411553 5696 ntBASIC18.26■□□□□ 0.51
NPAS4Q8IUM7 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NPAS4Q8IUM7 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NPAS4Q8IUM7 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC18.25■□□□□ 0.51
NPAS4Q8IUM7 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
NPAS4Q8IUM7 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC18.25■□□□□ 0.51
NPAS4Q8IUM7 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
NPAS4Q8IUM7 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
NPAS4Q8IUM7 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
NPAS4Q8IUM7 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
NPAS4Q8IUM7 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
NPAS4Q8IUM7 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
NPAS4Q8IUM7 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC18.25■□□□□ 0.51
NPAS4Q8IUM7 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
NPAS4Q8IUM7 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
NPAS4Q8IUM7 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
NPAS4Q8IUM7 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
NPAS4Q8IUM7 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
NPAS4Q8IUM7 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
NPAS4Q8IUM7 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC18.25■□□□□ 0.51
NPAS4Q8IUM7 TREML5P-201ENST00000421694 576 ntBASIC18.25■□□□□ 0.51
NPAS4Q8IUM7 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC18.25■□□□□ 0.51
NPAS4Q8IUM7 GATD1-206ENST00000526325 756 ntTSL 5 BASIC18.25■□□□□ 0.51
NPAS4Q8IUM7 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC18.25■□□□□ 0.51
NPAS4Q8IUM7 SLC25A39P2-201ENST00000537614 270 ntBASIC18.25■□□□□ 0.51
NPAS4Q8IUM7 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
NPAS4Q8IUM7 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
NPAS4Q8IUM7 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC18.25■□□□□ 0.51
NPAS4Q8IUM7 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC18.25■□□□□ 0.51
NPAS4Q8IUM7 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC18.25■□□□□ 0.51
NPAS4Q8IUM7 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
NPAS4Q8IUM7 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC18.25■□□□□ 0.51
NPAS4Q8IUM7 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
NPAS4Q8IUM7 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC18.25■□□□□ 0.51
NPAS4Q8IUM7 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
NPAS4Q8IUM7 PXK-206ENST00000463280 2825 ntTSL 2 BASIC18.25■□□□□ 0.51
NPAS4Q8IUM7 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC18.25■□□□□ 0.51
NPAS4Q8IUM7 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
NPAS4Q8IUM7 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
NPAS4Q8IUM7 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
NPAS4Q8IUM7 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
NPAS4Q8IUM7 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC18.25■□□□□ 0.51
NPAS4Q8IUM7 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
NPAS4Q8IUM7 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
NPAS4Q8IUM7 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
NPAS4Q8IUM7 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
NPAS4Q8IUM7 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC18.24■□□□□ 0.51
NPAS4Q8IUM7 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
NPAS4Q8IUM7 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
NPAS4Q8IUM7 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
NPAS4Q8IUM7 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
NPAS4Q8IUM7 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
NPAS4Q8IUM7 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC18.24■□□□□ 0.51
NPAS4Q8IUM7 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC18.24■□□□□ 0.51
NPAS4Q8IUM7 HNRNPA1P40-201ENST00000426371 1278 ntBASIC18.24■□□□□ 0.51
NPAS4Q8IUM7 PNKD-204ENST00000436005 978 ntTSL 5 BASIC18.24■□□□□ 0.51
NPAS4Q8IUM7 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC18.24■□□□□ 0.51
NPAS4Q8IUM7 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC18.24■□□□□ 0.51
NPAS4Q8IUM7 TERF1P3-201ENST00000505638 1227 ntBASIC18.24■□□□□ 0.51
NPAS4Q8IUM7 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
NPAS4Q8IUM7 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
NPAS4Q8IUM7 AC087641.1-201ENST00000557561 1021 ntBASIC18.24■□□□□ 0.51
NPAS4Q8IUM7 SSH2-211ENST00000590153 570 ntTSL 4 BASIC18.24■□□□□ 0.51
NPAS4Q8IUM7 AL158211.3-201ENST00000607385 239 ntBASIC18.24■□□□□ 0.51
NPAS4Q8IUM7 AP001350.2-201ENST00000625104 1094 ntBASIC18.24■□□□□ 0.51
NPAS4Q8IUM7 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC18.24■□□□□ 0.51
NPAS4Q8IUM7 SLC22A20-204ENST00000530038 1673 ntBASIC18.24■□□□□ 0.51
NPAS4Q8IUM7 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
NPAS4Q8IUM7 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
NPAS4Q8IUM7 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
NPAS4Q8IUM7 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
NPAS4Q8IUM7 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
NPAS4Q8IUM7 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
NPAS4Q8IUM7 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
NPAS4Q8IUM7 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
NPAS4Q8IUM7 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NPAS4Q8IUM7 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC18.23■□□□□ 0.51
NPAS4Q8IUM7 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 67.5 ms