Protein–RNA interactions for Protein: Q5VWM5

PRAMEF9, PRAME family member 9/15, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF9Q5VWM5 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PRAMEF9Q5VWM5 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
PRAMEF9Q5VWM5 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PRAMEF9Q5VWM5 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC16.5■□□□□ 0.23
PRAMEF9Q5VWM5 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
PRAMEF9Q5VWM5 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC16.5■□□□□ 0.23
PRAMEF9Q5VWM5 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC16.5■□□□□ 0.23
PRAMEF9Q5VWM5 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PRAMEF9Q5VWM5 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PRAMEF9Q5VWM5 AL139424.1-201ENST00000607572 797 ntBASIC16.5■□□□□ 0.23
PRAMEF9Q5VWM5 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC16.5■□□□□ 0.23
PRAMEF9Q5VWM5 TP73-AS1-207ENST00000624167 988 ntBASIC16.5■□□□□ 0.23
PRAMEF9Q5VWM5 NCF1C-201ENST00000438382 1427 ntBASIC16.5■□□□□ 0.23
PRAMEF9Q5VWM5 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC16.5■□□□□ 0.23
PRAMEF9Q5VWM5 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
PRAMEF9Q5VWM5 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PRAMEF9Q5VWM5 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PRAMEF9Q5VWM5 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
PRAMEF9Q5VWM5 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PRAMEF9Q5VWM5 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC16.5■□□□□ 0.23
PRAMEF9Q5VWM5 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PRAMEF9Q5VWM5 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
PRAMEF9Q5VWM5 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
PRAMEF9Q5VWM5 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PRAMEF9Q5VWM5 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PRAMEF9Q5VWM5 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
PRAMEF9Q5VWM5 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PRAMEF9Q5VWM5 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC16.49■□□□□ 0.23
PRAMEF9Q5VWM5 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PRAMEF9Q5VWM5 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC16.49■□□□□ 0.23
PRAMEF9Q5VWM5 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PRAMEF9Q5VWM5 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PRAMEF9Q5VWM5 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PRAMEF9Q5VWM5 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
PRAMEF9Q5VWM5 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
PRAMEF9Q5VWM5 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC16.49■□□□□ 0.23
PRAMEF9Q5VWM5 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
PRAMEF9Q5VWM5 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PRAMEF9Q5VWM5 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PRAMEF9Q5VWM5 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PRAMEF9Q5VWM5 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC16.49■□□□□ 0.23
PRAMEF9Q5VWM5 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PRAMEF9Q5VWM5 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PRAMEF9Q5VWM5 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
PRAMEF9Q5VWM5 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC16.49■□□□□ 0.23
PRAMEF9Q5VWM5 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC16.49■□□□□ 0.23
PRAMEF9Q5VWM5 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC16.49■□□□□ 0.23
PRAMEF9Q5VWM5 TOLLIP-AS1-201ENST00000530897 939 ntBASIC16.49■□□□□ 0.23
PRAMEF9Q5VWM5 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC16.49■□□□□ 0.23
PRAMEF9Q5VWM5 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC16.49■□□□□ 0.23
PRAMEF9Q5VWM5 SDCCAG3P1-201ENST00000589292 1150 ntBASIC16.49■□□□□ 0.23
PRAMEF9Q5VWM5 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PRAMEF9Q5VWM5 AL589182.2-201ENST00000619332 1049 ntBASIC16.49■□□□□ 0.23
PRAMEF9Q5VWM5 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC16.49■□□□□ 0.23
PRAMEF9Q5VWM5 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC16.49■□□□□ 0.23
PRAMEF9Q5VWM5 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
PRAMEF9Q5VWM5 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PRAMEF9Q5VWM5 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PRAMEF9Q5VWM5 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PRAMEF9Q5VWM5 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PRAMEF9Q5VWM5 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC16.49■□□□□ 0.23
PRAMEF9Q5VWM5 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
PRAMEF9Q5VWM5 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PRAMEF9Q5VWM5 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PRAMEF9Q5VWM5 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC16.48■□□□□ 0.23
PRAMEF9Q5VWM5 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PRAMEF9Q5VWM5 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PRAMEF9Q5VWM5 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
PRAMEF9Q5VWM5 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PRAMEF9Q5VWM5 AL645728.1-201ENST00000366221 2101 ntBASIC16.48■□□□□ 0.23
PRAMEF9Q5VWM5 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC16.48■□□□□ 0.23
PRAMEF9Q5VWM5 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PRAMEF9Q5VWM5 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
PRAMEF9Q5VWM5 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
PRAMEF9Q5VWM5 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
PRAMEF9Q5VWM5 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC16.48■□□□□ 0.23
PRAMEF9Q5VWM5 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC16.48■□□□□ 0.23
PRAMEF9Q5VWM5 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC16.48■□□□□ 0.23
PRAMEF9Q5VWM5 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC16.48■□□□□ 0.23
PRAMEF9Q5VWM5 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC16.48■□□□□ 0.23
PRAMEF9Q5VWM5 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
PRAMEF9Q5VWM5 AC004706.3-202ENST00000621574 984 ntBASIC16.48■□□□□ 0.23
PRAMEF9Q5VWM5 AL691432.3-201ENST00000621860 400 ntBASIC16.48■□□□□ 0.23
PRAMEF9Q5VWM5 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
PRAMEF9Q5VWM5 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
PRAMEF9Q5VWM5 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
PRAMEF9Q5VWM5 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PRAMEF9Q5VWM5 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
PRAMEF9Q5VWM5 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PRAMEF9Q5VWM5 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC16.48■□□□□ 0.23
PRAMEF9Q5VWM5 AC243591.1-201ENST00000452967 1364 ntBASIC16.48■□□□□ 0.23
PRAMEF9Q5VWM5 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC16.48■□□□□ 0.23
PRAMEF9Q5VWM5 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PRAMEF9Q5VWM5 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
PRAMEF9Q5VWM5 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PRAMEF9Q5VWM5 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PRAMEF9Q5VWM5 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC16.48■□□□□ 0.23
PRAMEF9Q5VWM5 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC16.48■□□□□ 0.23
PRAMEF9Q5VWM5 HTR7P1-202ENST00000624664 4411 ntBASIC16.48■□□□□ 0.23
PRAMEF9Q5VWM5 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms