Protein–RNA interactions for Protein: Q52M75

LINC01554, Putative uncharacterized protein encoded by LINC01554, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01554Q52M75 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC8.69□□□□□ -1.02
LINC01554Q52M75 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
LINC01554Q52M75 SAP30BP-202ENST00000355423 2439 ntTSL 2 BASIC8.69□□□□□ -1.02
LINC01554Q52M75 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC8.69□□□□□ -1.02
LINC01554Q52M75 ZEB2-234ENST00000636413 8984 ntTSL 5 BASIC8.69□□□□□ -1.02
LINC01554Q52M75 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC8.69□□□□□ -1.02
LINC01554Q52M75 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
LINC01554Q52M75 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
LINC01554Q52M75 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
LINC01554Q52M75 ADGRG6-204ENST00000367609 6887 ntAPPRIS P3 TSL 1 (best) BASIC8.68□□□□□ -1.02
LINC01554Q52M75 ZNF815P-204ENST00000434898 1737 ntBASIC8.68□□□□□ -1.02
LINC01554Q52M75 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC8.68□□□□□ -1.02
LINC01554Q52M75 MADD-208ENST00000405573 1823 ntTSL 5 BASIC8.68□□□□□ -1.02
LINC01554Q52M75 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
LINC01554Q52M75 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC8.68□□□□□ -1.02
LINC01554Q52M75 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC8.68□□□□□ -1.02
LINC01554Q52M75 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
LINC01554Q52M75 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC8.68□□□□□ -1.02
LINC01554Q52M75 DENND4C-205ENST00000434457 6718 ntTSL 5 BASIC8.68□□□□□ -1.02
LINC01554Q52M75 C5AR2-201ENST00000595464 6746 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
LINC01554Q52M75 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
LINC01554Q52M75 DNAJC3-AS1-201ENST00000499499 2908 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
LINC01554Q52M75 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
LINC01554Q52M75 TBCD-201ENST00000355528 7168 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
LINC01554Q52M75 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
LINC01554Q52M75 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC8.68□□□□□ -1.02
LINC01554Q52M75 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
LINC01554Q52M75 GDPD2-204ENST00000536730 2171 ntTSL 2 BASIC8.68□□□□□ -1.02
LINC01554Q52M75 KIRREL3-205ENST00000529097 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC8.68□□□□□ -1.02
LINC01554Q52M75 AOC4P-203ENST00000566825 2289 ntBASIC8.68□□□□□ -1.02
LINC01554Q52M75 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC8.68□□□□□ -1.02
LINC01554Q52M75 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC8.68□□□□□ -1.02
LINC01554Q52M75 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC8.68□□□□□ -1.02
LINC01554Q52M75 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
LINC01554Q52M75 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
LINC01554Q52M75 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC8.68□□□□□ -1.02
LINC01554Q52M75 HSCB-202ENST00000398941 955 ntTSL 2 BASIC8.68□□□□□ -1.02
LINC01554Q52M75 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC8.68□□□□□ -1.02
LINC01554Q52M75 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
LINC01554Q52M75 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC8.68□□□□□ -1.02
LINC01554Q52M75 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
LINC01554Q52M75 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC8.68□□□□□ -1.02
LINC01554Q52M75 PHB2-213ENST00000546111 858 ntTSL 2 BASIC8.68□□□□□ -1.02
LINC01554Q52M75 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC8.68□□□□□ -1.02
LINC01554Q52M75 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC8.68□□□□□ -1.02
LINC01554Q52M75 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC8.68□□□□□ -1.02
LINC01554Q52M75 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC8.68□□□□□ -1.02
LINC01554Q52M75 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC8.68□□□□□ -1.02
LINC01554Q52M75 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
LINC01554Q52M75 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
LINC01554Q52M75 WWOX-218ENST00000627394 894 ntTSL 5 BASIC8.68□□□□□ -1.02
LINC01554Q52M75 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
LINC01554Q52M75 MKNK1-203ENST00000371945 2618 ntAPPRIS ALT2 TSL 1 (best) BASIC8.68□□□□□ -1.02
LINC01554Q52M75 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC8.68□□□□□ -1.02
LINC01554Q52M75 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
LINC01554Q52M75 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC8.68□□□□□ -1.02
LINC01554Q52M75 AC010980.2-201ENST00000587099 1412 ntBASIC8.68□□□□□ -1.02
LINC01554Q52M75 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
LINC01554Q52M75 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
LINC01554Q52M75 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC8.68□□□□□ -1.02
LINC01554Q52M75 ATP2C2-AS1-201ENST00000565700 2998 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
LINC01554Q52M75 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC8.68□□□□□ -1.02
LINC01554Q52M75 KRT17P1-201ENST00000399211 1546 ntBASIC8.68□□□□□ -1.02
LINC01554Q52M75 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC8.68□□□□□ -1.02
LINC01554Q52M75 ADAMTSL1-205ENST00000380548 8030 ntAPPRIS P1 TSL 5 BASIC8.68□□□□□ -1.02
LINC01554Q52M75 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC8.68□□□□□ -1.02
LINC01554Q52M75 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
LINC01554Q52M75 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC8.68□□□□□ -1.02
LINC01554Q52M75 GLIS3-201ENST00000324333 6667 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
LINC01554Q52M75 ABI1-213ENST00000536334 3380 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
LINC01554Q52M75 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
LINC01554Q52M75 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
LINC01554Q52M75 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC8.68□□□□□ -1.02
LINC01554Q52M75 MYO9B-206ENST00000595618 7623 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
LINC01554Q52M75 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC8.68□□□□□ -1.02
LINC01554Q52M75 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC8.68□□□□□ -1.02
LINC01554Q52M75 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
LINC01554Q52M75 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC8.68□□□□□ -1.02
LINC01554Q52M75 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
LINC01554Q52M75 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
LINC01554Q52M75 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
LINC01554Q52M75 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC8.68□□□□□ -1.02
LINC01554Q52M75 COL1A2-213ENST00000620463 4523 ntTSL 5 BASIC8.68□□□□□ -1.02
LINC01554Q52M75 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC8.68□□□□□ -1.02
LINC01554Q52M75 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC8.68□□□□□ -1.02
LINC01554Q52M75 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC8.68□□□□□ -1.02
LINC01554Q52M75 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC8.67□□□□□ -1.02
LINC01554Q52M75 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
LINC01554Q52M75 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
LINC01554Q52M75 HCFC1-202ENST00000369984 8375 ntAPPRIS ALT2 TSL 5 BASIC8.67□□□□□ -1.02
LINC01554Q52M75 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC8.67□□□□□ -1.02
LINC01554Q52M75 CXCR5-201ENST00000292174 4431 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
LINC01554Q52M75 USP22-201ENST00000261497 5220 ntAPPRIS P2 TSL 1 (best) BASIC8.67□□□□□ -1.02
LINC01554Q52M75 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
LINC01554Q52M75 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC8.67□□□□□ -1.02
LINC01554Q52M75 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
LINC01554Q52M75 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC8.67□□□□□ -1.02
LINC01554Q52M75 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
LINC01554Q52M75 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
LINC01554Q52M75 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Retrieved 100 of 98,524 protein–RNA pairs in 57.5 ms