Protein–RNA interactions for Protein: Q12805

EFEMP1, EGF-containing fibulin-like extracellular matrix protein 1, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFEMP1Q12805 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
EFEMP1Q12805 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC17.81■□□□□ 0.44
EFEMP1Q12805 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
EFEMP1Q12805 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
EFEMP1Q12805 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
EFEMP1Q12805 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
EFEMP1Q12805 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
EFEMP1Q12805 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
EFEMP1Q12805 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
EFEMP1Q12805 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
EFEMP1Q12805 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
EFEMP1Q12805 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
EFEMP1Q12805 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
EFEMP1Q12805 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
EFEMP1Q12805 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC17.81■□□□□ 0.44
EFEMP1Q12805 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
EFEMP1Q12805 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
EFEMP1Q12805 SLC25A6P2-201ENST00000497974 877 ntBASIC17.81■□□□□ 0.44
EFEMP1Q12805 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC17.81■□□□□ 0.44
EFEMP1Q12805 MAL2-202ENST00000531508 892 ntTSL 3 BASIC17.81■□□□□ 0.44
EFEMP1Q12805 CD63-210ENST00000550776 870 ntTSL 5 BASIC17.81■□□□□ 0.44
EFEMP1Q12805 AC040169.1-201ENST00000565382 521 ntBASIC17.81■□□□□ 0.44
EFEMP1Q12805 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC17.81■□□□□ 0.44
EFEMP1Q12805 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC17.81■□□□□ 0.44
EFEMP1Q12805 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC17.81■□□□□ 0.44
EFEMP1Q12805 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC17.81■□□□□ 0.44
EFEMP1Q12805 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC17.81■□□□□ 0.44
EFEMP1Q12805 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
EFEMP1Q12805 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
EFEMP1Q12805 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
EFEMP1Q12805 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
EFEMP1Q12805 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC17.81■□□□□ 0.44
EFEMP1Q12805 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
EFEMP1Q12805 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
EFEMP1Q12805 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
EFEMP1Q12805 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
EFEMP1Q12805 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
EFEMP1Q12805 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
EFEMP1Q12805 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
EFEMP1Q12805 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
EFEMP1Q12805 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
EFEMP1Q12805 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
EFEMP1Q12805 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
EFEMP1Q12805 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
EFEMP1Q12805 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
EFEMP1Q12805 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
EFEMP1Q12805 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
EFEMP1Q12805 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
EFEMP1Q12805 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC17.8■□□□□ 0.44
EFEMP1Q12805 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
EFEMP1Q12805 BX842568.4-201ENST00000421222 227 ntBASIC17.8■□□□□ 0.44
EFEMP1Q12805 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC17.8■□□□□ 0.44
EFEMP1Q12805 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC17.8■□□□□ 0.44
EFEMP1Q12805 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC17.8■□□□□ 0.44
EFEMP1Q12805 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC17.8■□□□□ 0.44
EFEMP1Q12805 AC010507.1-201ENST00000633895 436 ntBASIC17.8■□□□□ 0.44
EFEMP1Q12805 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
EFEMP1Q12805 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
EFEMP1Q12805 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC17.8■□□□□ 0.44
EFEMP1Q12805 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
EFEMP1Q12805 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
EFEMP1Q12805 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
EFEMP1Q12805 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC17.8■□□□□ 0.44
EFEMP1Q12805 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
EFEMP1Q12805 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
EFEMP1Q12805 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC17.8■□□□□ 0.44
EFEMP1Q12805 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
EFEMP1Q12805 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC17.8■□□□□ 0.44
EFEMP1Q12805 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
EFEMP1Q12805 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
EFEMP1Q12805 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC17.79■□□□□ 0.44
EFEMP1Q12805 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
EFEMP1Q12805 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
EFEMP1Q12805 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC17.79■□□□□ 0.44
EFEMP1Q12805 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
EFEMP1Q12805 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
EFEMP1Q12805 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
EFEMP1Q12805 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
EFEMP1Q12805 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
EFEMP1Q12805 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
EFEMP1Q12805 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
EFEMP1Q12805 IMP4-203ENST00000409935 958 ntTSL 5 BASIC17.79■□□□□ 0.44
EFEMP1Q12805 COX10-202ENST00000429152 875 ntTSL 2 BASIC17.79■□□□□ 0.44
EFEMP1Q12805 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC17.79■□□□□ 0.44
EFEMP1Q12805 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC17.79■□□□□ 0.44
EFEMP1Q12805 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
EFEMP1Q12805 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC17.79■□□□□ 0.44
EFEMP1Q12805 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
EFEMP1Q12805 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
EFEMP1Q12805 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
EFEMP1Q12805 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC17.79■□□□□ 0.44
EFEMP1Q12805 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
EFEMP1Q12805 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
EFEMP1Q12805 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
EFEMP1Q12805 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
EFEMP1Q12805 AC106820.2-201ENST00000563775 3264 ntBASIC17.79■□□□□ 0.44
EFEMP1Q12805 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
EFEMP1Q12805 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
EFEMP1Q12805 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
EFEMP1Q12805 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms