Protein–RNA interactions for Protein: Q00532

CDKL1, Cyclin-dependent kinase-like 1, humanhuman

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL1Q00532 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC16.92■□□□□ 0.3
CDKL1Q00532 KRT16P4-201ENST00000453883 522 ntBASIC16.92■□□□□ 0.3
CDKL1Q00532 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CDKL1Q00532 FICD-205ENST00000552758 603 ntTSL 2 BASIC16.92■□□□□ 0.3
CDKL1Q00532 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC16.92■□□□□ 0.3
CDKL1Q00532 MIR5100-201ENST00000579544 119 ntBASIC16.92■□□□□ 0.3
CDKL1Q00532 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CDKL1Q00532 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CDKL1Q00532 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CDKL1Q00532 PCDHA1-201ENST00000378133 2726 ntBASIC16.92■□□□□ 0.3
CDKL1Q00532 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CDKL1Q00532 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
CDKL1Q00532 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CDKL1Q00532 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CDKL1Q00532 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC16.92■□□□□ 0.3
CDKL1Q00532 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CDKL1Q00532 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
CDKL1Q00532 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
CDKL1Q00532 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC16.92■□□□□ 0.3
CDKL1Q00532 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CDKL1Q00532 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CDKL1Q00532 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CDKL1Q00532 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CDKL1Q00532 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDKL1Q00532 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
CDKL1Q00532 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC16.91■□□□□ 0.3
CDKL1Q00532 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
CDKL1Q00532 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDKL1Q00532 SIGLEC16-201ENST00000599858 1437 ntBASIC16.91■□□□□ 0.3
CDKL1Q00532 ABR-203ENST00000536794 2213 ntTSL 2 BASIC16.91■□□□□ 0.3
CDKL1Q00532 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDKL1Q00532 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
CDKL1Q00532 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC16.91■□□□□ 0.3
CDKL1Q00532 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CDKL1Q00532 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
CDKL1Q00532 ABCD1P5-201ENST00000445663 754 ntBASIC16.91■□□□□ 0.3
CDKL1Q00532 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC16.91■□□□□ 0.3
CDKL1Q00532 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CDKL1Q00532 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC16.91■□□□□ 0.3
CDKL1Q00532 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC16.91■□□□□ 0.3
CDKL1Q00532 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC16.91■□□□□ 0.3
CDKL1Q00532 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC16.91■□□□□ 0.3
CDKL1Q00532 AC093458.2-201ENST00000623150 629 ntBASIC16.91■□□□□ 0.3
CDKL1Q00532 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDKL1Q00532 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC16.91■□□□□ 0.3
CDKL1Q00532 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
CDKL1Q00532 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDKL1Q00532 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CDKL1Q00532 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CDKL1Q00532 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDKL1Q00532 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDKL1Q00532 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDKL1Q00532 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CDKL1Q00532 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDKL1Q00532 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC16.91■□□□□ 0.3
CDKL1Q00532 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
CDKL1Q00532 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
CDKL1Q00532 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDKL1Q00532 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC16.9■□□□□ 0.3
CDKL1Q00532 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDKL1Q00532 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
CDKL1Q00532 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDKL1Q00532 AGK-211ENST00000629555 2765 ntTSL 5 BASIC16.9■□□□□ 0.3
CDKL1Q00532 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CDKL1Q00532 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDKL1Q00532 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
CDKL1Q00532 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
CDKL1Q00532 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC16.9■□□□□ 0.3
CDKL1Q00532 SPDYE21P-201ENST00000413323 827 ntBASIC16.9■□□□□ 0.3
CDKL1Q00532 AL020989.1-201ENST00000422979 469 ntBASIC16.9■□□□□ 0.3
CDKL1Q00532 UPK3BP1-201ENST00000428678 509 ntBASIC16.9■□□□□ 0.3
CDKL1Q00532 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC16.9■□□□□ 0.3
CDKL1Q00532 PNN-202ENST00000553331 656 ntTSL 3 BASIC16.9■□□□□ 0.3
CDKL1Q00532 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC16.9■□□□□ 0.3
CDKL1Q00532 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC16.9■□□□□ 0.3
CDKL1Q00532 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC16.9■□□□□ 0.3
CDKL1Q00532 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
CDKL1Q00532 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
CDKL1Q00532 AC073592.4-201ENST00000623827 446 ntBASIC16.9■□□□□ 0.3
CDKL1Q00532 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
CDKL1Q00532 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC16.9■□□□□ 0.3
CDKL1Q00532 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC16.9■□□□□ 0.3
CDKL1Q00532 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC16.9■□□□□ 0.3
CDKL1Q00532 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDKL1Q00532 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC16.9■□□□□ 0.3
CDKL1Q00532 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDKL1Q00532 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDKL1Q00532 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CDKL1Q00532 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC16.9■□□□□ 0.3
CDKL1Q00532 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDKL1Q00532 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.3
CDKL1Q00532 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.3
CDKL1Q00532 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC16.89■□□□□ 0.3
CDKL1Q00532 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC16.89■□□□□ 0.3
CDKL1Q00532 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.3
CDKL1Q00532 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.3
CDKL1Q00532 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC16.89■□□□□ 0.29
CDKL1Q00532 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDKL1Q00532 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC16.89■□□□□ 0.29
CDKL1Q00532 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms