Protein–RNA interactions for Protein: P57739

CLDN2, Claudin-2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2P57739 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC16.89■□□□□ 0.29
CLDN2P57739 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC16.89■□□□□ 0.29
CLDN2P57739 RPS15-207ENST00000591032 550 ntTSL 3 BASIC16.89■□□□□ 0.29
CLDN2P57739 AL355385.1-201ENST00000606123 409 ntBASIC16.89■□□□□ 0.29
CLDN2P57739 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
CLDN2P57739 CITED2-204ENST00000618718 901 ntTSL 2 BASIC16.89■□□□□ 0.29
CLDN2P57739 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CLDN2P57739 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CLDN2P57739 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC16.89■□□□□ 0.29
CLDN2P57739 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CLDN2P57739 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC16.89■□□□□ 0.29
CLDN2P57739 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CLDN2P57739 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
CLDN2P57739 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CLDN2P57739 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
CLDN2P57739 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CLDN2P57739 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CLDN2P57739 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
CLDN2P57739 PCDHB18P-201ENST00000524813 2368 ntBASIC16.88■□□□□ 0.29
CLDN2P57739 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CLDN2P57739 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CLDN2P57739 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CLDN2P57739 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC16.88■□□□□ 0.29
CLDN2P57739 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CLDN2P57739 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CLDN2P57739 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC16.88■□□□□ 0.29
CLDN2P57739 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
CLDN2P57739 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC16.88■□□□□ 0.29
CLDN2P57739 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CLDN2P57739 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CLDN2P57739 EML3-217ENST00000531557 2509 ntTSL 5 BASIC16.88■□□□□ 0.29
CLDN2P57739 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC16.88■□□□□ 0.29
CLDN2P57739 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CLDN2P57739 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CLDN2P57739 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CLDN2P57739 FALEC-201ENST00000416894 566 ntTSL 3 BASIC16.88■□□□□ 0.29
CLDN2P57739 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CLDN2P57739 NMU-203ENST00000507338 658 ntTSL 3 BASIC16.88■□□□□ 0.29
CLDN2P57739 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC16.88■□□□□ 0.29
CLDN2P57739 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC16.88■□□□□ 0.29
CLDN2P57739 RPL28-209ENST00000560055 670 ntTSL 3 BASIC16.88■□□□□ 0.29
CLDN2P57739 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
CLDN2P57739 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CLDN2P57739 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC16.88■□□□□ 0.29
CLDN2P57739 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CLDN2P57739 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CLDN2P57739 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CLDN2P57739 GNE-204ENST00000539208 2190 ntTSL 2 BASIC16.88■□□□□ 0.29
CLDN2P57739 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
CLDN2P57739 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CLDN2P57739 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CLDN2P57739 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CLDN2P57739 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC16.88■□□□□ 0.29
CLDN2P57739 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC16.88■□□□□ 0.29
CLDN2P57739 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CLDN2P57739 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CLDN2P57739 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CLDN2P57739 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CLDN2P57739 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC16.87■□□□□ 0.29
CLDN2P57739 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CLDN2P57739 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC16.87■□□□□ 0.29
CLDN2P57739 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CLDN2P57739 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CLDN2P57739 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CLDN2P57739 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CLDN2P57739 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC16.87■□□□□ 0.29
CLDN2P57739 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC16.87■□□□□ 0.29
CLDN2P57739 ACTG1P14-201ENST00000446382 1122 ntBASIC16.87■□□□□ 0.29
CLDN2P57739 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CLDN2P57739 AC027612.4-201ENST00000605371 583 ntBASIC16.87■□□□□ 0.29
CLDN2P57739 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC16.87■□□□□ 0.29
CLDN2P57739 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CLDN2P57739 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
CLDN2P57739 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
CLDN2P57739 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CLDN2P57739 HARS-203ENST00000431330 1774 ntTSL 2 BASIC16.87■□□□□ 0.29
CLDN2P57739 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC16.87■□□□□ 0.29
CLDN2P57739 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
CLDN2P57739 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC16.86■□□□□ 0.29
CLDN2P57739 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CLDN2P57739 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CLDN2P57739 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
CLDN2P57739 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
CLDN2P57739 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
CLDN2P57739 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
CLDN2P57739 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CLDN2P57739 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CLDN2P57739 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC16.86■□□□□ 0.29
CLDN2P57739 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
CLDN2P57739 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC16.86■□□□□ 0.29
CLDN2P57739 HMGN1P19-201ENST00000436976 333 ntBASIC16.86■□□□□ 0.29
CLDN2P57739 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
CLDN2P57739 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CLDN2P57739 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC16.86■□□□□ 0.29
CLDN2P57739 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC16.86■□□□□ 0.29
CLDN2P57739 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC16.86■□□□□ 0.29
CLDN2P57739 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC16.86■□□□□ 0.29
CLDN2P57739 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CLDN2P57739 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC16.86■□□□□ 0.29
CLDN2P57739 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC16.86■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms