Protein–RNA interactions for Protein: P40925

MDH1, Malate dehydrogenase, cytoplasmic, humanhuman

Known RBP Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1P40925 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
MDH1P40925 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
MDH1P40925 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
MDH1P40925 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
MDH1P40925 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
MDH1P40925 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.36
MDH1P40925 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC17.27■□□□□ 0.36
MDH1P40925 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
MDH1P40925 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC17.27■□□□□ 0.36
MDH1P40925 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
MDH1P40925 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
MDH1P40925 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC17.27■□□□□ 0.36
MDH1P40925 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC17.27■□□□□ 0.36
MDH1P40925 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC17.27■□□□□ 0.36
MDH1P40925 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC17.27■□□□□ 0.36
MDH1P40925 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
MDH1P40925 PBK-203ENST00000522944 1499 ntTSL 2 BASIC17.27■□□□□ 0.36
MDH1P40925 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC17.27■□□□□ 0.36
MDH1P40925 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
MDH1P40925 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
MDH1P40925 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC17.27■□□□□ 0.36
MDH1P40925 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
MDH1P40925 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC17.27■□□□□ 0.36
MDH1P40925 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC17.27■□□□□ 0.36
MDH1P40925 AP002490.2-201ENST00000524791 560 ntBASIC17.27■□□□□ 0.36
MDH1P40925 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC17.27■□□□□ 0.36
MDH1P40925 RPS15-203ENST00000586096 570 ntTSL 2 BASIC17.27■□□□□ 0.36
MDH1P40925 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC17.27■□□□□ 0.36
MDH1P40925 AL023803.3-201ENST00000615559 522 ntBASIC17.27■□□□□ 0.36
MDH1P40925 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
MDH1P40925 PC-208ENST00000529047 1607 ntTSL 3 BASIC17.27■□□□□ 0.36
MDH1P40925 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
MDH1P40925 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
MDH1P40925 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
MDH1P40925 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.35
MDH1P40925 AL603832.2-201ENST00000566195 2125 ntBASIC17.27■□□□□ 0.35
MDH1P40925 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
MDH1P40925 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC17.27■□□□□ 0.35
MDH1P40925 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
MDH1P40925 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
MDH1P40925 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
MDH1P40925 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
MDH1P40925 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC17.26■□□□□ 0.35
MDH1P40925 AC073347.1-201ENST00000421633 2643 ntBASIC17.26■□□□□ 0.35
MDH1P40925 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
MDH1P40925 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
MDH1P40925 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC17.26■□□□□ 0.35
MDH1P40925 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
MDH1P40925 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
MDH1P40925 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
MDH1P40925 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC17.26■□□□□ 0.35
MDH1P40925 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC17.26■□□□□ 0.35
MDH1P40925 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
MDH1P40925 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
MDH1P40925 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC17.26■□□□□ 0.35
MDH1P40925 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
MDH1P40925 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC17.26■□□□□ 0.35
MDH1P40925 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC17.26■□□□□ 0.35
MDH1P40925 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC17.26■□□□□ 0.35
MDH1P40925 RN7SL471P-201ENST00000580476 299 ntBASIC17.26■□□□□ 0.35
MDH1P40925 TMED1-207ENST00000591695 809 ntTSL 5 BASIC17.26■□□□□ 0.35
MDH1P40925 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC17.26■□□□□ 0.35
MDH1P40925 AL109923.1-201ENST00000618799 583 ntBASIC17.26■□□□□ 0.35
MDH1P40925 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
MDH1P40925 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
MDH1P40925 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
MDH1P40925 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
MDH1P40925 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
MDH1P40925 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
MDH1P40925 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
MDH1P40925 FRMD8P1-201ENST00000440433 1524 ntBASIC17.26■□□□□ 0.35
MDH1P40925 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
MDH1P40925 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
MDH1P40925 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
MDH1P40925 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
MDH1P40925 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC17.26■□□□□ 0.35
MDH1P40925 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
MDH1P40925 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
MDH1P40925 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
MDH1P40925 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC17.25■□□□□ 0.35
MDH1P40925 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
MDH1P40925 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
MDH1P40925 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
MDH1P40925 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
MDH1P40925 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
MDH1P40925 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
MDH1P40925 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC17.25■□□□□ 0.35
MDH1P40925 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
MDH1P40925 AC112698.1-201ENST00000510299 916 ntBASIC17.25■□□□□ 0.35
MDH1P40925 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
MDH1P40925 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC17.25■□□□□ 0.35
MDH1P40925 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC17.25■□□□□ 0.35
MDH1P40925 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC17.25■□□□□ 0.35
MDH1P40925 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC17.25■□□□□ 0.35
MDH1P40925 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC17.25■□□□□ 0.35
MDH1P40925 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
MDH1P40925 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
MDH1P40925 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
MDH1P40925 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC17.25■□□□□ 0.35
MDH1P40925 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms