Protein–RNA interactions for Protein: P32246

CCR1, C-C chemokine receptor type 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCR1P32246 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCR1P32246 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC17.76■□□□□ 0.43
CCR1P32246 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCR1P32246 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC17.76■□□□□ 0.43
CCR1P32246 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC17.76■□□□□ 0.43
CCR1P32246 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC17.75■□□□□ 0.43
CCR1P32246 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCR1P32246 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCR1P32246 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC17.75■□□□□ 0.43
CCR1P32246 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCR1P32246 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCR1P32246 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCR1P32246 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCR1P32246 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCR1P32246 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC17.75■□□□□ 0.43
CCR1P32246 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CCR1P32246 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC17.75■□□□□ 0.43
CCR1P32246 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
CCR1P32246 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCR1P32246 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCR1P32246 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCR1P32246 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC17.75■□□□□ 0.43
CCR1P32246 AL022342.1-201ENST00000400363 863 ntBASIC17.75■□□□□ 0.43
CCR1P32246 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CCR1P32246 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC17.75■□□□□ 0.43
CCR1P32246 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC17.75■□□□□ 0.43
CCR1P32246 SLC25A1P1-201ENST00000528351 927 ntBASIC17.75■□□□□ 0.43
CCR1P32246 RIN3-211ENST00000557762 517 ntTSL 3 BASIC17.75■□□□□ 0.43
CCR1P32246 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC17.75■□□□□ 0.43
CCR1P32246 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
CCR1P32246 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC17.75■□□□□ 0.43
CCR1P32246 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
CCR1P32246 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCR1P32246 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC17.75■□□□□ 0.43
CCR1P32246 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCR1P32246 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC17.75■□□□□ 0.43
CCR1P32246 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CCR1P32246 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCR1P32246 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCR1P32246 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CCR1P32246 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CCR1P32246 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCR1P32246 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCR1P32246 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCR1P32246 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC17.74■□□□□ 0.43
CCR1P32246 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CCR1P32246 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCR1P32246 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCR1P32246 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CCR1P32246 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCR1P32246 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CCR1P32246 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCR1P32246 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCR1P32246 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCR1P32246 MRPL20P1-201ENST00000400819 433 ntBASIC17.74■□□□□ 0.43
CCR1P32246 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC17.74■□□□□ 0.43
CCR1P32246 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
CCR1P32246 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC17.74■□□□□ 0.43
CCR1P32246 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC17.74■□□□□ 0.43
CCR1P32246 AC124947.2-201ENST00000547118 1133 ntBASIC17.74■□□□□ 0.43
CCR1P32246 CIPC-205ENST00000555437 566 ntTSL 3 BASIC17.74■□□□□ 0.43
CCR1P32246 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC17.74■□□□□ 0.43
CCR1P32246 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC17.74■□□□□ 0.43
CCR1P32246 NME4-212ENST00000621774 904 ntTSL 3 BASIC17.74■□□□□ 0.43
CCR1P32246 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC17.74■□□□□ 0.43
CCR1P32246 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
CCR1P32246 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCR1P32246 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CCR1P32246 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCR1P32246 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCR1P32246 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CCR1P32246 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CCR1P32246 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CCR1P32246 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC17.74■□□□□ 0.43
CCR1P32246 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
CCR1P32246 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CCR1P32246 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
CCR1P32246 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CCR1P32246 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCR1P32246 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCR1P32246 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CCR1P32246 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC17.74■□□□□ 0.43
CCR1P32246 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
CCR1P32246 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
CCR1P32246 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
CCR1P32246 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
CCR1P32246 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CCR1P32246 FRMD8P1-201ENST00000440433 1524 ntBASIC17.73■□□□□ 0.43
CCR1P32246 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCR1P32246 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCR1P32246 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CCR1P32246 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCR1P32246 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC17.73■□□□□ 0.43
CCR1P32246 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
CCR1P32246 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCR1P32246 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCR1P32246 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCR1P32246 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC17.73■□□□□ 0.43
CCR1P32246 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCR1P32246 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC17.73■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms