Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
HOXC8P31273 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC18.54■□□□□ 0.56
HOXC8P31273 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC18.54■□□□□ 0.56
HOXC8P31273 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC18.54■□□□□ 0.56
HOXC8P31273 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC18.54■□□□□ 0.56
HOXC8P31273 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC18.54■□□□□ 0.56
HOXC8P31273 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC18.54■□□□□ 0.56
HOXC8P31273 AC073389.1-201ENST00000595595 795 ntBASIC18.54■□□□□ 0.56
HOXC8P31273 LINC00896-202ENST00000609602 2128 ntBASIC18.54■□□□□ 0.56
HOXC8P31273 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC18.54■□□□□ 0.56
HOXC8P31273 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
HOXC8P31273 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HOXC8P31273 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
HOXC8P31273 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HOXC8P31273 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HOXC8P31273 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC18.54■□□□□ 0.56
HOXC8P31273 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
HOXC8P31273 FO538757.1-201ENST00000623083 1397 ntBASIC18.54■□□□□ 0.56
HOXC8P31273 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
HOXC8P31273 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC18.53■□□□□ 0.56
HOXC8P31273 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
HOXC8P31273 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
HOXC8P31273 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
HOXC8P31273 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
HOXC8P31273 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
HOXC8P31273 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
HOXC8P31273 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
HOXC8P31273 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
HOXC8P31273 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
HOXC8P31273 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
HOXC8P31273 GNAS-203ENST00000306120 1878 ntBASIC18.53■□□□□ 0.56
HOXC8P31273 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
HOXC8P31273 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
HOXC8P31273 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
HOXC8P31273 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
HOXC8P31273 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC18.53■□□□□ 0.56
HOXC8P31273 PPP6R2P1-201ENST00000450880 1275 ntBASIC18.53■□□□□ 0.56
HOXC8P31273 STX3-203ENST00000529177 1571 ntTSL 2 BASIC18.53■□□□□ 0.56
HOXC8P31273 AL138918.1-201ENST00000568306 659 ntBASIC18.53■□□□□ 0.56
HOXC8P31273 NAA60-208ENST00000570819 833 ntTSL 2 BASIC18.53■□□□□ 0.56
HOXC8P31273 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC18.53■□□□□ 0.56
HOXC8P31273 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
HOXC8P31273 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC18.53■□□□□ 0.56
HOXC8P31273 AL021920.2-201ENST00000624828 1351 ntBASIC18.53■□□□□ 0.56
HOXC8P31273 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
HOXC8P31273 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
HOXC8P31273 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
HOXC8P31273 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
HOXC8P31273 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
HOXC8P31273 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
HOXC8P31273 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC18.52■□□□□ 0.56
HOXC8P31273 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
HOXC8P31273 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
HOXC8P31273 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC18.52■□□□□ 0.56
HOXC8P31273 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
HOXC8P31273 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
HOXC8P31273 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
HOXC8P31273 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
HOXC8P31273 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
HOXC8P31273 SLC9A3P2-201ENST00000447821 2021 ntBASIC18.52■□□□□ 0.56
HOXC8P31273 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
HOXC8P31273 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC18.52■□□□□ 0.56
HOXC8P31273 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC18.52■□□□□ 0.56
HOXC8P31273 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
HOXC8P31273 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC18.52■□□□□ 0.56
HOXC8P31273 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
HOXC8P31273 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC18.52■□□□□ 0.56
HOXC8P31273 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
HOXC8P31273 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
HOXC8P31273 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
HOXC8P31273 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
HOXC8P31273 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
HOXC8P31273 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC18.52■□□□□ 0.56
HOXC8P31273 PRR29-209ENST00000582540 967 ntTSL 2 BASIC18.52■□□□□ 0.56
HOXC8P31273 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC18.52■□□□□ 0.56
HOXC8P31273 AC021097.1-201ENST00000607902 574 ntBASIC18.52■□□□□ 0.56
HOXC8P31273 COQ4-205ENST00000609948 956 ntTSL 2 BASIC18.52■□□□□ 0.56
HOXC8P31273 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
HOXC8P31273 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
HOXC8P31273 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
HOXC8P31273 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC18.52■□□□□ 0.55
HOXC8P31273 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.55
HOXC8P31273 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
HOXC8P31273 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC18.52■□□□□ 0.55
HOXC8P31273 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.55
HOXC8P31273 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.55
HOXC8P31273 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC18.52■□□□□ 0.55
HOXC8P31273 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC18.51■□□□□ 0.55
HOXC8P31273 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC18.51■□□□□ 0.55
HOXC8P31273 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
HOXC8P31273 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
HOXC8P31273 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
HOXC8P31273 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC18.51■□□□□ 0.55
HOXC8P31273 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
HOXC8P31273 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
HOXC8P31273 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
HOXC8P31273 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
HOXC8P31273 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
HOXC8P31273 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
HOXC8P31273 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms