Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC16.93■□□□□ 0.3
VARSP26640 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC16.93■□□□□ 0.3
VARSP26640 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
VARSP26640 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
VARSP26640 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC16.93■□□□□ 0.3
VARSP26640 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
VARSP26640 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC16.93■□□□□ 0.3
VARSP26640 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
VARSP26640 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
VARSP26640 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC16.93■□□□□ 0.3
VARSP26640 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
VARSP26640 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
VARSP26640 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
VARSP26640 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
VARSP26640 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
VARSP26640 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
VARSP26640 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
VARSP26640 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
VARSP26640 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC16.93■□□□□ 0.3
VARSP26640 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC16.93■□□□□ 0.3
VARSP26640 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC16.93■□□□□ 0.3
VARSP26640 AC009078.2-202ENST00000463353 338 ntBASIC16.93■□□□□ 0.3
VARSP26640 BET1L-206ENST00000486280 665 ntTSL 3 BASIC16.93■□□□□ 0.3
VARSP26640 AC002558.1-201ENST00000488906 803 ntBASIC16.93■□□□□ 0.3
VARSP26640 AC122714.2-201ENST00000502787 707 ntBASIC16.93■□□□□ 0.3
VARSP26640 FOSL1P1-201ENST00000511041 816 ntBASIC16.93■□□□□ 0.3
VARSP26640 AC011467.2-201ENST00000598425 242 ntBASIC16.93■□□□□ 0.3
VARSP26640 CALM3-211ENST00000598871 561 ntTSL 4 BASIC16.93■□□□□ 0.3
VARSP26640 AL121912.1-201ENST00000603683 238 ntBASIC16.93■□□□□ 0.3
VARSP26640 AL732292.2-201ENST00000609649 430 ntBASIC16.93■□□□□ 0.3
VARSP26640 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC16.93■□□□□ 0.3
VARSP26640 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC16.93■□□□□ 0.3
VARSP26640 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC16.93■□□□□ 0.3
VARSP26640 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
VARSP26640 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
VARSP26640 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
VARSP26640 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC16.93■□□□□ 0.3
VARSP26640 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC16.93■□□□□ 0.3
VARSP26640 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
VARSP26640 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
VARSP26640 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
VARSP26640 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
VARSP26640 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
VARSP26640 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
VARSP26640 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
VARSP26640 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC16.92■□□□□ 0.3
VARSP26640 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC16.92■□□□□ 0.3
VARSP26640 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
VARSP26640 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC16.92■□□□□ 0.3
VARSP26640 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
VARSP26640 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
VARSP26640 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC16.92■□□□□ 0.3
VARSP26640 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
VARSP26640 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
VARSP26640 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
VARSP26640 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
VARSP26640 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
VARSP26640 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC16.92■□□□□ 0.3
VARSP26640 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC16.92■□□□□ 0.3
VARSP26640 RCN1P2-201ENST00000398357 915 ntBASIC16.92■□□□□ 0.3
VARSP26640 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
VARSP26640 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
VARSP26640 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
VARSP26640 PENK-208ENST00000523051 772 ntTSL 5 BASIC16.92■□□□□ 0.3
VARSP26640 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC16.92■□□□□ 0.3
VARSP26640 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC16.92■□□□□ 0.3
VARSP26640 AL139327.4-201ENST00000612362 153 ntBASIC16.92■□□□□ 0.3
VARSP26640 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
VARSP26640 AL049757.1-201ENST00000616842 1596 ntBASIC16.92■□□□□ 0.3
VARSP26640 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
VARSP26640 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
VARSP26640 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
VARSP26640 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
VARSP26640 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC16.92■□□□□ 0.3
VARSP26640 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
VARSP26640 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
VARSP26640 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
VARSP26640 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
VARSP26640 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
VARSP26640 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
VARSP26640 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
VARSP26640 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC16.91■□□□□ 0.3
VARSP26640 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
VARSP26640 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
VARSP26640 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
VARSP26640 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
VARSP26640 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
VARSP26640 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC16.91■□□□□ 0.3
VARSP26640 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
VARSP26640 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
VARSP26640 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
VARSP26640 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC16.91■□□□□ 0.3
VARSP26640 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
VARSP26640 CCS-201ENST00000310190 942 ntTSL 5 BASIC16.91■□□□□ 0.3
VARSP26640 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
VARSP26640 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC16.91■□□□□ 0.3
VARSP26640 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
VARSP26640 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
VARSP26640 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
VARSP26640 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC16.91■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms