Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
NCK1P16333 SPDYE15P-201ENST00000424157 909 ntBASIC16.27■□□□□ 0.2
NCK1P16333 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC16.27■□□□□ 0.2
NCK1P16333 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC16.27■□□□□ 0.2
NCK1P16333 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
NCK1P16333 CLN6-221ENST00000637494 765 ntTSL 5 BASIC16.27■□□□□ 0.2
NCK1P16333 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC16.27■□□□□ 0.2
NCK1P16333 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC16.27■□□□□ 0.2
NCK1P16333 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
NCK1P16333 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
NCK1P16333 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
NCK1P16333 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
NCK1P16333 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
NCK1P16333 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
NCK1P16333 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC16.27■□□□□ 0.19
NCK1P16333 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
NCK1P16333 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC16.27■□□□□ 0.19
NCK1P16333 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
NCK1P16333 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
NCK1P16333 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
NCK1P16333 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
NCK1P16333 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
NCK1P16333 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC16.27■□□□□ 0.19
NCK1P16333 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
NCK1P16333 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
NCK1P16333 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
NCK1P16333 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC16.26■□□□□ 0.19
NCK1P16333 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
NCK1P16333 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
NCK1P16333 AL513523.2-202ENST00000427283 2040 ntBASIC16.26■□□□□ 0.19
NCK1P16333 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC16.26■□□□□ 0.19
NCK1P16333 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC16.26■□□□□ 0.19
NCK1P16333 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
NCK1P16333 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC16.26■□□□□ 0.19
NCK1P16333 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
NCK1P16333 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC16.26■□□□□ 0.19
NCK1P16333 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC16.26■□□□□ 0.19
NCK1P16333 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC16.26■□□□□ 0.19
NCK1P16333 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
NCK1P16333 PON3-205ENST00000451904 1053 ntTSL 3 BASIC16.26■□□□□ 0.19
NCK1P16333 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
NCK1P16333 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC16.26■□□□□ 0.19
NCK1P16333 AP003733.1-201ENST00000491725 852 ntBASIC16.26■□□□□ 0.19
NCK1P16333 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
NCK1P16333 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
NCK1P16333 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
NCK1P16333 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC16.26■□□□□ 0.19
NCK1P16333 MYB-201ENST00000316528 3571 ntTSL 5 BASIC16.26■□□□□ 0.19
NCK1P16333 MYB-241ENST00000616088 3573 ntTSL 5 BASIC16.26■□□□□ 0.19
NCK1P16333 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
NCK1P16333 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC16.26■□□□□ 0.19
NCK1P16333 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
NCK1P16333 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
NCK1P16333 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
NCK1P16333 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC16.26■□□□□ 0.19
NCK1P16333 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
NCK1P16333 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC16.26■□□□□ 0.19
NCK1P16333 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC16.26■□□□□ 0.19
NCK1P16333 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC16.26■□□□□ 0.19
NCK1P16333 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
NCK1P16333 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
NCK1P16333 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
NCK1P16333 EGFEM1P-202ENST00000431685 1563 ntBASIC16.26■□□□□ 0.19
NCK1P16333 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC16.26■□□□□ 0.19
NCK1P16333 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
NCK1P16333 LINC01568-207ENST00000641790 1380 ntBASIC16.26■□□□□ 0.19
NCK1P16333 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC16.25■□□□□ 0.19
NCK1P16333 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
NCK1P16333 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NCK1P16333 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
NCK1P16333 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC16.25■□□□□ 0.19
NCK1P16333 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NCK1P16333 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
NCK1P16333 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
NCK1P16333 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
NCK1P16333 STK24-203ENST00000397517 4578 ntTSL 2 BASIC16.25■□□□□ 0.19
NCK1P16333 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NCK1P16333 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NCK1P16333 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NCK1P16333 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
NCK1P16333 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
NCK1P16333 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
NCK1P16333 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
NCK1P16333 AC092597.1-201ENST00000487352 616 ntBASIC16.25■□□□□ 0.19
NCK1P16333 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC16.25■□□□□ 0.19
NCK1P16333 TMA16-209ENST00000513272 803 ntTSL 2 BASIC16.25■□□□□ 0.19
NCK1P16333 IGHV3-52-201ENST00000519770 353 ntBASIC16.25■□□□□ 0.19
NCK1P16333 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
NCK1P16333 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
NCK1P16333 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC16.25■□□□□ 0.19
NCK1P16333 AL138966.2-201ENST00000621997 464 ntBASIC16.25■□□□□ 0.19
NCK1P16333 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC16.25■□□□□ 0.19
NCK1P16333 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC16.25■□□□□ 0.19
NCK1P16333 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
NCK1P16333 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NCK1P16333 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
NCK1P16333 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC16.25■□□□□ 0.19
NCK1P16333 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
NCK1P16333 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
NCK1P16333 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms