Protein–RNA interactions for Protein: P0CG40

SP9, Transcription factor Sp9, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SP9P0CG40 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
SP9P0CG40 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
SP9P0CG40 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SP9P0CG40 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SP9P0CG40 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
SP9P0CG40 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SP9P0CG40 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
SP9P0CG40 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC16.7■□□□□ 0.26
SP9P0CG40 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC16.7■□□□□ 0.26
SP9P0CG40 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC16.7■□□□□ 0.26
SP9P0CG40 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC16.7■□□□□ 0.26
SP9P0CG40 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC16.7■□□□□ 0.26
SP9P0CG40 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SP9P0CG40 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC16.7■□□□□ 0.26
SP9P0CG40 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC16.7■□□□□ 0.26
SP9P0CG40 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SP9P0CG40 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SP9P0CG40 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC16.7■□□□□ 0.26
SP9P0CG40 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC16.7■□□□□ 0.26
SP9P0CG40 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
SP9P0CG40 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SP9P0CG40 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SP9P0CG40 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC16.69■□□□□ 0.26
SP9P0CG40 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SP9P0CG40 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SP9P0CG40 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
SP9P0CG40 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
SP9P0CG40 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
SP9P0CG40 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC16.69■□□□□ 0.26
SP9P0CG40 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SP9P0CG40 REXO1L9P-201ENST00000604264 2108 ntBASIC16.69■□□□□ 0.26
SP9P0CG40 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SP9P0CG40 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
SP9P0CG40 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC16.69■□□□□ 0.26
SP9P0CG40 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC16.69■□□□□ 0.26
SP9P0CG40 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
SP9P0CG40 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
SP9P0CG40 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
SP9P0CG40 MPV17-208ENST00000405076 603 ntTSL 5 BASIC16.69■□□□□ 0.26
SP9P0CG40 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC16.69■□□□□ 0.26
SP9P0CG40 KRT223P-202ENST00000449164 1292 ntBASIC16.69■□□□□ 0.26
SP9P0CG40 CD81-207ENST00000481687 890 ntTSL 2 BASIC16.69■□□□□ 0.26
SP9P0CG40 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC16.69■□□□□ 0.26
SP9P0CG40 ZNF890P-202ENST00000530367 1156 ntBASIC16.69■□□□□ 0.26
SP9P0CG40 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC16.69■□□□□ 0.26
SP9P0CG40 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC16.69■□□□□ 0.26
SP9P0CG40 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
SP9P0CG40 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC16.69■□□□□ 0.26
SP9P0CG40 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
SP9P0CG40 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SP9P0CG40 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SP9P0CG40 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
SP9P0CG40 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SP9P0CG40 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SP9P0CG40 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
SP9P0CG40 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SP9P0CG40 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC16.68■□□□□ 0.26
SP9P0CG40 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SP9P0CG40 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
SP9P0CG40 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SP9P0CG40 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
SP9P0CG40 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC16.68■□□□□ 0.26
SP9P0CG40 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SP9P0CG40 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
SP9P0CG40 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC16.68■□□□□ 0.26
SP9P0CG40 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
SP9P0CG40 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
SP9P0CG40 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC16.68■□□□□ 0.26
SP9P0CG40 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC16.68■□□□□ 0.26
SP9P0CG40 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC16.68■□□□□ 0.26
SP9P0CG40 AC234783.1-201ENST00000441761 496 ntBASIC16.68■□□□□ 0.26
SP9P0CG40 KRT18P34-201ENST00000488218 1270 ntBASIC16.68■□□□□ 0.26
SP9P0CG40 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SP9P0CG40 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SP9P0CG40 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SP9P0CG40 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC16.68■□□□□ 0.26
SP9P0CG40 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC16.68■□□□□ 0.26
SP9P0CG40 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SP9P0CG40 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC16.68■□□□□ 0.26
SP9P0CG40 AC004790.1-201ENST00000612686 536 ntBASIC16.68■□□□□ 0.26
SP9P0CG40 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
SP9P0CG40 AC133552.6-201ENST00000613406 534 ntBASIC16.68■□□□□ 0.26
SP9P0CG40 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC16.68■□□□□ 0.26
SP9P0CG40 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SP9P0CG40 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC16.68■□□□□ 0.26
SP9P0CG40 STK4-201ENST00000372801 2038 ntTSL 2 BASIC16.68■□□□□ 0.26
SP9P0CG40 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SP9P0CG40 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
SP9P0CG40 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC16.68■□□□□ 0.26
SP9P0CG40 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SP9P0CG40 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC16.68■□□□□ 0.26
SP9P0CG40 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC16.68■□□□□ 0.26
SP9P0CG40 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC16.68■□□□□ 0.26
SP9P0CG40 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
SP9P0CG40 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC16.68■□□□□ 0.26
SP9P0CG40 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC16.68■□□□□ 0.26
SP9P0CG40 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
SP9P0CG40 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SP9P0CG40 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC16.67■□□□□ 0.26
SP9P0CG40 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC16.67■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms