Protein–RNA interactions for Protein: P09603

CSF1, Macrophage colony-stimulating factor 1, humanhuman

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1P09603 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CSF1P09603 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
CSF1P09603 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CSF1P09603 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CSF1P09603 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CSF1P09603 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
CSF1P09603 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CSF1P09603 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
CSF1P09603 IPPK-202ENST00000375522 882 ntTSL 3 BASIC14.9□□□□□ -0.02
CSF1P09603 COPS8-203ENST00000409334 794 ntTSL 5 BASIC14.9□□□□□ -0.02
CSF1P09603 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC14.9□□□□□ -0.02
CSF1P09603 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC14.9□□□□□ -0.02
CSF1P09603 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC14.9□□□□□ -0.02
CSF1P09603 TPM4P1-201ENST00000436100 807 ntBASIC14.9□□□□□ -0.02
CSF1P09603 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC14.9□□□□□ -0.02
CSF1P09603 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC14.9□□□□□ -0.02
CSF1P09603 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
CSF1P09603 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC14.9□□□□□ -0.02
CSF1P09603 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CSF1P09603 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CSF1P09603 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CSF1P09603 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CSF1P09603 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
CSF1P09603 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC14.9□□□□□ -0.02
CSF1P09603 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CSF1P09603 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
CSF1P09603 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC14.9□□□□□ -0.02
CSF1P09603 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CSF1P09603 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC14.9□□□□□ -0.02
CSF1P09603 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC14.9□□□□□ -0.02
CSF1P09603 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CSF1P09603 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC14.9□□□□□ -0.02
CSF1P09603 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CSF1P09603 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CSF1P09603 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC14.89□□□□□ -0.03
CSF1P09603 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CSF1P09603 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CSF1P09603 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
CSF1P09603 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CSF1P09603 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CSF1P09603 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CSF1P09603 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CSF1P09603 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CSF1P09603 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CSF1P09603 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CSF1P09603 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CSF1P09603 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CSF1P09603 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC14.89□□□□□ -0.03
CSF1P09603 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
CSF1P09603 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CSF1P09603 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CSF1P09603 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC14.89□□□□□ -0.03
CSF1P09603 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CSF1P09603 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CSF1P09603 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
CSF1P09603 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CSF1P09603 GRAMD4P1-201ENST00000435181 1110 ntBASIC14.89□□□□□ -0.03
CSF1P09603 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CSF1P09603 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC14.89□□□□□ -0.03
CSF1P09603 FAM86EP-206ENST00000510506 987 ntBASIC14.89□□□□□ -0.03
CSF1P09603 PP7080-204ENST00000510714 601 ntTSL 3 BASIC14.89□□□□□ -0.03
CSF1P09603 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC14.89□□□□□ -0.03
CSF1P09603 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC14.89□□□□□ -0.03
CSF1P09603 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC14.89□□□□□ -0.03
CSF1P09603 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC14.89□□□□□ -0.03
CSF1P09603 AL121894.2-201ENST00000602977 491 ntBASIC14.89□□□□□ -0.03
CSF1P09603 AL023803.3-201ENST00000615559 522 ntBASIC14.89□□□□□ -0.03
CSF1P09603 RNF216P1-203ENST00000404404 2427 ntBASIC14.89□□□□□ -0.03
CSF1P09603 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CSF1P09603 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CSF1P09603 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
CSF1P09603 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
CSF1P09603 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CSF1P09603 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC14.89□□□□□ -0.03
CSF1P09603 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CSF1P09603 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC14.89□□□□□ -0.03
CSF1P09603 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
CSF1P09603 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
CSF1P09603 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
CSF1P09603 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CSF1P09603 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC14.88□□□□□ -0.03
CSF1P09603 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CSF1P09603 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
CSF1P09603 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC14.88□□□□□ -0.03
CSF1P09603 AC007950.2-201ENST00000615045 2347 ntBASIC14.88□□□□□ -0.03
CSF1P09603 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC14.88□□□□□ -0.03
CSF1P09603 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
CSF1P09603 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
CSF1P09603 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CSF1P09603 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CSF1P09603 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CSF1P09603 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
CSF1P09603 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
CSF1P09603 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CSF1P09603 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CSF1P09603 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CSF1P09603 AP000523.1-201ENST00000398242 1049 ntBASIC14.88□□□□□ -0.03
CSF1P09603 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CSF1P09603 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CSF1P09603 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms