Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC19.3■□□□□ 0.68
TPM3P06753 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC19.3■□□□□ 0.68
TPM3P06753 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TPM3P06753 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
TPM3P06753 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
TPM3P06753 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
TPM3P06753 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC19.29■□□□□ 0.68
TPM3P06753 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC19.29■□□□□ 0.68
TPM3P06753 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
TPM3P06753 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
TPM3P06753 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
TPM3P06753 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TPM3P06753 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TPM3P06753 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC19.29■□□□□ 0.68
TPM3P06753 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC19.29■□□□□ 0.68
TPM3P06753 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
TPM3P06753 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TPM3P06753 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TPM3P06753 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
TPM3P06753 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TPM3P06753 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TPM3P06753 AC002558.1-201ENST00000488906 803 ntBASIC19.29■□□□□ 0.68
TPM3P06753 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC19.29■□□□□ 0.68
TPM3P06753 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
TPM3P06753 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TPM3P06753 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
TPM3P06753 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC19.29■□□□□ 0.68
TPM3P06753 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TPM3P06753 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TPM3P06753 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TPM3P06753 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC19.29■□□□□ 0.68
TPM3P06753 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TPM3P06753 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TPM3P06753 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC19.28■□□□□ 0.68
TPM3P06753 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
TPM3P06753 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TPM3P06753 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
TPM3P06753 ACE-204ENST00000428043 5120 ntTSL 2 BASIC19.28■□□□□ 0.68
TPM3P06753 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
TPM3P06753 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TPM3P06753 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TPM3P06753 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TPM3P06753 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
TPM3P06753 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC19.28■□□□□ 0.68
TPM3P06753 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC19.28■□□□□ 0.68
TPM3P06753 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
TPM3P06753 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TPM3P06753 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TPM3P06753 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC19.28■□□□□ 0.68
TPM3P06753 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TPM3P06753 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TPM3P06753 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
TPM3P06753 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC19.28■□□□□ 0.68
TPM3P06753 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC19.28■□□□□ 0.68
TPM3P06753 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC19.28■□□□□ 0.68
TPM3P06753 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC19.28■□□□□ 0.68
TPM3P06753 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
TPM3P06753 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC19.28■□□□□ 0.68
TPM3P06753 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC19.28■□□□□ 0.68
TPM3P06753 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TPM3P06753 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TPM3P06753 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC19.28■□□□□ 0.68
TPM3P06753 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC19.28■□□□□ 0.68
TPM3P06753 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC19.28■□□□□ 0.68
TPM3P06753 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
TPM3P06753 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC19.28■□□□□ 0.68
TPM3P06753 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TPM3P06753 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC19.28■□□□□ 0.68
TPM3P06753 AL365203.3-201ENST00000609742 2057 ntBASIC19.28■□□□□ 0.68
TPM3P06753 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TPM3P06753 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
TPM3P06753 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TPM3P06753 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
TPM3P06753 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC19.27■□□□□ 0.68
TPM3P06753 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TPM3P06753 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
TPM3P06753 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC19.27■□□□□ 0.68
TPM3P06753 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
TPM3P06753 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
TPM3P06753 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
TPM3P06753 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC19.27■□□□□ 0.68
TPM3P06753 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
TPM3P06753 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC19.27■□□□□ 0.68
TPM3P06753 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TPM3P06753 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TPM3P06753 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
TPM3P06753 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC19.27■□□□□ 0.68
TPM3P06753 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
TPM3P06753 KRT18P48-201ENST00000434763 852 ntBASIC19.27■□□□□ 0.68
TPM3P06753 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC19.27■□□□□ 0.68
TPM3P06753 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC19.27■□□□□ 0.68
TPM3P06753 AC008550.1-201ENST00000511500 884 ntBASIC19.27■□□□□ 0.68
TPM3P06753 RPS20-210ENST00000523936 899 ntTSL 2 BASIC19.27■□□□□ 0.68
TPM3P06753 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC19.27■□□□□ 0.68
TPM3P06753 TEN1-204ENST00000588202 862 ntTSL 3 BASIC19.27■□□□□ 0.68
TPM3P06753 FAM87A-204ENST00000613235 858 ntBASIC19.27■□□□□ 0.68
TPM3P06753 SNX21-213ENST00000614929 587 ntTSL 5 BASIC19.27■□□□□ 0.68
TPM3P06753 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC19.27■□□□□ 0.68
TPM3P06753 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
TPM3P06753 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms