Protein–RNA interactions for Protein: P02538

KRT6A, Keratin, type II cytoskeletal 6A, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6AP02538 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
KRT6AP02538 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
KRT6AP02538 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
KRT6AP02538 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC16.67■□□□□ 0.26
KRT6AP02538 NSUN5P1-202ENST00000421140 1535 ntBASIC16.67■□□□□ 0.26
KRT6AP02538 NSUN5P2-203ENST00000457352 1529 ntBASIC16.67■□□□□ 0.26
KRT6AP02538 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
KRT6AP02538 INTS4P1-201ENST00000438455 1935 ntBASIC16.67■□□□□ 0.26
KRT6AP02538 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC16.67■□□□□ 0.26
KRT6AP02538 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC16.67■□□□□ 0.26
KRT6AP02538 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC16.67■□□□□ 0.26
KRT6AP02538 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
KRT6AP02538 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
KRT6AP02538 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC16.67■□□□□ 0.26
KRT6AP02538 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
KRT6AP02538 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
KRT6AP02538 ISCU-203ENST00000431221 799 ntTSL 2 BASIC16.67■□□□□ 0.26
KRT6AP02538 AP002383.4-201ENST00000442518 975 ntBASIC16.67■□□□□ 0.26
KRT6AP02538 LINC00265-3P-201ENST00000447588 903 ntBASIC16.67■□□□□ 0.26
KRT6AP02538 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC16.67■□□□□ 0.26
KRT6AP02538 COX5A-202ENST00000562233 441 ntTSL 3 BASIC16.67■□□□□ 0.26
KRT6AP02538 COX5A-204ENST00000567270 579 ntTSL 3 BASIC16.67■□□□□ 0.26
KRT6AP02538 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC16.67■□□□□ 0.26
KRT6AP02538 IL11-204ENST00000590625 1028 ntTSL 2 BASIC16.67■□□□□ 0.26
KRT6AP02538 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC16.67■□□□□ 0.26
KRT6AP02538 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC16.67■□□□□ 0.26
KRT6AP02538 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC16.67■□□□□ 0.26
KRT6AP02538 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
KRT6AP02538 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
KRT6AP02538 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC16.67■□□□□ 0.26
KRT6AP02538 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
KRT6AP02538 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
KRT6AP02538 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
KRT6AP02538 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
KRT6AP02538 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
KRT6AP02538 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC16.67■□□□□ 0.26
KRT6AP02538 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
KRT6AP02538 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
KRT6AP02538 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
KRT6AP02538 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
KRT6AP02538 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
KRT6AP02538 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
KRT6AP02538 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
KRT6AP02538 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
KRT6AP02538 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
KRT6AP02538 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
KRT6AP02538 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
KRT6AP02538 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
KRT6AP02538 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
KRT6AP02538 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
KRT6AP02538 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
KRT6AP02538 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC16.66■□□□□ 0.26
KRT6AP02538 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
KRT6AP02538 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
KRT6AP02538 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
KRT6AP02538 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
KRT6AP02538 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
KRT6AP02538 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC16.66■□□□□ 0.26
KRT6AP02538 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC16.66■□□□□ 0.26
KRT6AP02538 SRP19-202ENST00000445150 833 ntTSL 2 BASIC16.66■□□□□ 0.26
KRT6AP02538 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
KRT6AP02538 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC16.66■□□□□ 0.26
KRT6AP02538 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
KRT6AP02538 BNIP3P18-201ENST00000593976 575 ntBASIC16.66■□□□□ 0.26
KRT6AP02538 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC16.66■□□□□ 0.26
KRT6AP02538 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC16.66■□□□□ 0.26
KRT6AP02538 AP000550.4-202ENST00000639755 178 ntBASIC16.66■□□□□ 0.26
KRT6AP02538 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
KRT6AP02538 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
KRT6AP02538 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
KRT6AP02538 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
KRT6AP02538 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC16.66■□□□□ 0.26
KRT6AP02538 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC16.66■□□□□ 0.26
KRT6AP02538 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
KRT6AP02538 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
KRT6AP02538 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
KRT6AP02538 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC16.66■□□□□ 0.26
KRT6AP02538 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
KRT6AP02538 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC16.66■□□□□ 0.26
KRT6AP02538 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
KRT6AP02538 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
KRT6AP02538 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
KRT6AP02538 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC16.65■□□□□ 0.26
KRT6AP02538 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
KRT6AP02538 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
KRT6AP02538 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
KRT6AP02538 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
KRT6AP02538 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
KRT6AP02538 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
KRT6AP02538 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
KRT6AP02538 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
KRT6AP02538 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
KRT6AP02538 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
KRT6AP02538 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC16.65■□□□□ 0.26
KRT6AP02538 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC16.65■□□□□ 0.26
KRT6AP02538 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC16.65■□□□□ 0.26
KRT6AP02538 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC16.65■□□□□ 0.26
KRT6AP02538 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC16.65■□□□□ 0.26
KRT6AP02538 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC16.65■□□□□ 0.26
KRT6AP02538 OVCH1-AS1-204ENST00000641955 5529 ntBASIC16.65■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms