Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC19.37■□□□□ 0.69
ALDH1A1P00352 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC19.37■□□□□ 0.69
ALDH1A1P00352 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC19.37■□□□□ 0.69
ALDH1A1P00352 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
ALDH1A1P00352 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
ALDH1A1P00352 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC19.37■□□□□ 0.69
ALDH1A1P00352 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ALDH1A1P00352 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
ALDH1A1P00352 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
ALDH1A1P00352 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
ALDH1A1P00352 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ALDH1A1P00352 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ALDH1A1P00352 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
ALDH1A1P00352 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
ALDH1A1P00352 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC19.37■□□□□ 0.69
ALDH1A1P00352 AC022210.1-201ENST00000449856 793 ntBASIC19.37■□□□□ 0.69
ALDH1A1P00352 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC19.37■□□□□ 0.69
ALDH1A1P00352 AC135586.1-201ENST00000539323 574 ntBASIC19.37■□□□□ 0.69
ALDH1A1P00352 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC19.37■□□□□ 0.69
ALDH1A1P00352 APOC4-201ENST00000591600 348 ntTSL 3 BASIC19.37■□□□□ 0.69
ALDH1A1P00352 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
ALDH1A1P00352 AL589739.1-201ENST00000607720 493 ntBASIC19.37■□□□□ 0.69
ALDH1A1P00352 AC004840.1-201ENST00000636359 365 ntBASIC19.37■□□□□ 0.69
ALDH1A1P00352 AC135776.1-201ENST00000319817 2481 ntBASIC19.37■□□□□ 0.69
ALDH1A1P00352 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
ALDH1A1P00352 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ALDH1A1P00352 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
ALDH1A1P00352 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
ALDH1A1P00352 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ALDH1A1P00352 REXO1L11P-201ENST00000620964 1927 ntBASIC19.37■□□□□ 0.69
ALDH1A1P00352 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC19.37■□□□□ 0.69
ALDH1A1P00352 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
ALDH1A1P00352 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
ALDH1A1P00352 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ALDH1A1P00352 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC19.36■□□□□ 0.69
ALDH1A1P00352 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
ALDH1A1P00352 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
ALDH1A1P00352 TOP3BP1-201ENST00000420768 1380 ntBASIC19.36■□□□□ 0.69
ALDH1A1P00352 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
ALDH1A1P00352 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC19.36■□□□□ 0.69
ALDH1A1P00352 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
ALDH1A1P00352 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ALDH1A1P00352 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
ALDH1A1P00352 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ALDH1A1P00352 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
ALDH1A1P00352 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC19.36■□□□□ 0.69
ALDH1A1P00352 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC19.36■□□□□ 0.69
ALDH1A1P00352 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
ALDH1A1P00352 AC093004.1-201ENST00000508850 424 ntBASIC19.36■□□□□ 0.69
ALDH1A1P00352 ZNF890P-202ENST00000530367 1156 ntBASIC19.36■□□□□ 0.69
ALDH1A1P00352 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC19.36■□□□□ 0.69
ALDH1A1P00352 LITAF-210ENST00000571976 548 ntTSL 2 BASIC19.36■□□□□ 0.69
ALDH1A1P00352 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC19.36■□□□□ 0.69
ALDH1A1P00352 LITAF-214ENST00000574703 486 ntTSL 2 BASIC19.36■□□□□ 0.69
ALDH1A1P00352 MNT-208ENST00000575394 606 ntTSL 4 BASIC19.36■□□□□ 0.69
ALDH1A1P00352 AC021097.1-201ENST00000607902 574 ntBASIC19.36■□□□□ 0.69
ALDH1A1P00352 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC19.36■□□□□ 0.69
ALDH1A1P00352 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
ALDH1A1P00352 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ALDH1A1P00352 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
ALDH1A1P00352 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ALDH1A1P00352 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
ALDH1A1P00352 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
ALDH1A1P00352 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
ALDH1A1P00352 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ALDH1A1P00352 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
ALDH1A1P00352 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ALDH1A1P00352 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
ALDH1A1P00352 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC19.35■□□□□ 0.69
ALDH1A1P00352 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ALDH1A1P00352 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ALDH1A1P00352 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ALDH1A1P00352 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
ALDH1A1P00352 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
ALDH1A1P00352 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
ALDH1A1P00352 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
ALDH1A1P00352 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC19.35■□□□□ 0.69
ALDH1A1P00352 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
ALDH1A1P00352 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC19.35■□□□□ 0.69
ALDH1A1P00352 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC19.35■□□□□ 0.69
ALDH1A1P00352 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ALDH1A1P00352 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC19.35■□□□□ 0.69
ALDH1A1P00352 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC19.35■□□□□ 0.69
ALDH1A1P00352 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC19.35■□□□□ 0.69
ALDH1A1P00352 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC19.35■□□□□ 0.69
ALDH1A1P00352 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
ALDH1A1P00352 KRT18P34-201ENST00000488218 1270 ntBASIC19.35■□□□□ 0.69
ALDH1A1P00352 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
ALDH1A1P00352 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC19.35■□□□□ 0.69
ALDH1A1P00352 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC19.35■□□□□ 0.69
ALDH1A1P00352 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC19.35■□□□□ 0.69
ALDH1A1P00352 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ALDH1A1P00352 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
ALDH1A1P00352 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ALDH1A1P00352 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
ALDH1A1P00352 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC19.34■□□□□ 0.69
ALDH1A1P00352 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC19.34■□□□□ 0.69
ALDH1A1P00352 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
ALDH1A1P00352 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
ALDH1A1P00352 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC19.34■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 273.4 ms