Protein–RNA interactions for Protein: O94782

USP1, Ubiquitin carboxyl-terminal hydrolase 1, humanhuman

Predictions only

Length 785 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP1O94782 TPSP2-201ENST00000561760 610 ntBASIC17.42■□□□□ 0.38
USP1O94782 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC17.42■□□□□ 0.38
USP1O94782 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
USP1O94782 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
USP1O94782 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
USP1O94782 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC17.42■□□□□ 0.38
USP1O94782 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
USP1O94782 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC17.42■□□□□ 0.38
USP1O94782 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
USP1O94782 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC17.42■□□□□ 0.38
USP1O94782 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC17.42■□□□□ 0.38
USP1O94782 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC17.42■□□□□ 0.38
USP1O94782 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
USP1O94782 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
USP1O94782 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
USP1O94782 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
USP1O94782 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
USP1O94782 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC17.41■□□□□ 0.38
USP1O94782 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC17.41■□□□□ 0.38
USP1O94782 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
USP1O94782 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
USP1O94782 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
USP1O94782 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
USP1O94782 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
USP1O94782 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC17.41■□□□□ 0.38
USP1O94782 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC17.41■□□□□ 0.38
USP1O94782 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC17.41■□□□□ 0.38
USP1O94782 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC17.41■□□□□ 0.38
USP1O94782 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
USP1O94782 COPS8-203ENST00000409334 794 ntTSL 5 BASIC17.41■□□□□ 0.38
USP1O94782 KLF4P1-201ENST00000412782 1185 ntBASIC17.41■□□□□ 0.38
USP1O94782 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC17.41■□□□□ 0.38
USP1O94782 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
USP1O94782 AP002383.4-201ENST00000442518 975 ntBASIC17.41■□□□□ 0.38
USP1O94782 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC17.41■□□□□ 0.38
USP1O94782 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC17.41■□□□□ 0.38
USP1O94782 CDV3-207ENST00000508481 661 ntTSL 3 BASIC17.41■□□□□ 0.38
USP1O94782 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
USP1O94782 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC17.41■□□□□ 0.38
USP1O94782 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC17.41■□□□□ 0.38
USP1O94782 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
USP1O94782 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
USP1O94782 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
USP1O94782 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
USP1O94782 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
USP1O94782 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
USP1O94782 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
USP1O94782 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
USP1O94782 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
USP1O94782 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC17.4■□□□□ 0.38
USP1O94782 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC17.4■□□□□ 0.38
USP1O94782 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
USP1O94782 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
USP1O94782 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
USP1O94782 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC17.4■□□□□ 0.38
USP1O94782 OS9-205ENST00000413095 1660 ntTSL 2 BASIC17.4■□□□□ 0.38
USP1O94782 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
USP1O94782 CROCCP1-201ENST00000426910 5675 ntBASIC17.4■□□□□ 0.38
USP1O94782 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
USP1O94782 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
USP1O94782 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
USP1O94782 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
USP1O94782 CIB2-208ENST00000560618 804 ntTSL 2 BASIC17.4■□□□□ 0.38
USP1O94782 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC17.4■□□□□ 0.38
USP1O94782 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC17.4■□□□□ 0.38
USP1O94782 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
USP1O94782 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
USP1O94782 INTS4P1-201ENST00000438455 1935 ntBASIC17.4■□□□□ 0.38
USP1O94782 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
USP1O94782 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
USP1O94782 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC17.4■□□□□ 0.38
USP1O94782 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
USP1O94782 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
USP1O94782 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.38
USP1O94782 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
USP1O94782 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
USP1O94782 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
USP1O94782 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
USP1O94782 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC17.39■□□□□ 0.37
USP1O94782 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
USP1O94782 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
USP1O94782 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
USP1O94782 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
USP1O94782 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
USP1O94782 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
USP1O94782 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
USP1O94782 KRT17P6-201ENST00000453795 1220 ntBASIC17.39■□□□□ 0.37
USP1O94782 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC17.39■□□□□ 0.37
USP1O94782 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC17.39■□□□□ 0.37
USP1O94782 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC17.39■□□□□ 0.37
USP1O94782 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
USP1O94782 AP002414.4-201ENST00000589764 1148 ntBASIC17.39■□□□□ 0.37
USP1O94782 BNIP3P18-201ENST00000593976 575 ntBASIC17.39■□□□□ 0.37
USP1O94782 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC17.39■□□□□ 0.37
USP1O94782 AC073592.5-201ENST00000624854 528 ntBASIC17.39■□□□□ 0.37
USP1O94782 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
USP1O94782 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
USP1O94782 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
USP1O94782 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
USP1O94782 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 59.4 ms