Protein–RNA interactions for Protein: O00203

AP3B1, AP-3 complex subunit beta-1, humanhuman

Predictions only

Length 1,094 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1O00203 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
AP3B1O00203 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
AP3B1O00203 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
AP3B1O00203 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC17.36■□□□□ 0.37
AP3B1O00203 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
AP3B1O00203 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
AP3B1O00203 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC17.35■□□□□ 0.37
AP3B1O00203 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
AP3B1O00203 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
AP3B1O00203 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
AP3B1O00203 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
AP3B1O00203 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
AP3B1O00203 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
AP3B1O00203 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
AP3B1O00203 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
AP3B1O00203 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
AP3B1O00203 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
AP3B1O00203 ARMC10P1-201ENST00000313754 855 ntBASIC17.35■□□□□ 0.37
AP3B1O00203 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
AP3B1O00203 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC17.35■□□□□ 0.37
AP3B1O00203 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
AP3B1O00203 NUS1P1-201ENST00000446295 882 ntBASIC17.35■□□□□ 0.37
AP3B1O00203 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC17.35■□□□□ 0.37
AP3B1O00203 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC17.35■□□□□ 0.37
AP3B1O00203 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
AP3B1O00203 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
AP3B1O00203 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC17.35■□□□□ 0.37
AP3B1O00203 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC17.35■□□□□ 0.37
AP3B1O00203 AC092119.3-201ENST00000612618 583 ntBASIC17.35■□□□□ 0.37
AP3B1O00203 NF2-208ENST00000403435 2568 ntTSL 5 BASIC17.35■□□□□ 0.37
AP3B1O00203 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
AP3B1O00203 AL021920.2-201ENST00000624828 1351 ntBASIC17.35■□□□□ 0.37
AP3B1O00203 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
AP3B1O00203 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
AP3B1O00203 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
AP3B1O00203 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
AP3B1O00203 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC17.35■□□□□ 0.37
AP3B1O00203 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
AP3B1O00203 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
AP3B1O00203 AC097637.2-201ENST00000624096 1997 ntBASIC17.35■□□□□ 0.37
AP3B1O00203 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
AP3B1O00203 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
AP3B1O00203 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
AP3B1O00203 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
AP3B1O00203 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
AP3B1O00203 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
AP3B1O00203 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
AP3B1O00203 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC17.35■□□□□ 0.37
AP3B1O00203 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
AP3B1O00203 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC17.34■□□□□ 0.37
AP3B1O00203 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
AP3B1O00203 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
AP3B1O00203 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
AP3B1O00203 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
AP3B1O00203 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
AP3B1O00203 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
AP3B1O00203 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC17.34■□□□□ 0.37
AP3B1O00203 GID4-202ENST00000376345 1391 ntTSL 3 BASIC17.34■□□□□ 0.37
AP3B1O00203 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC17.34■□□□□ 0.37
AP3B1O00203 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
AP3B1O00203 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
AP3B1O00203 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
AP3B1O00203 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC17.34■□□□□ 0.37
AP3B1O00203 NUS1P2-201ENST00000417358 873 ntBASIC17.34■□□□□ 0.37
AP3B1O00203 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
AP3B1O00203 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC17.34■□□□□ 0.37
AP3B1O00203 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC17.34■□□□□ 0.37
AP3B1O00203 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
AP3B1O00203 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC17.34■□□□□ 0.37
AP3B1O00203 COPE-211ENST00000600932 1144 ntTSL 5 BASIC17.34■□□□□ 0.37
AP3B1O00203 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC17.34■□□□□ 0.37
AP3B1O00203 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
AP3B1O00203 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
AP3B1O00203 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC17.34■□□□□ 0.37
AP3B1O00203 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC17.34■□□□□ 0.37
AP3B1O00203 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
AP3B1O00203 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
AP3B1O00203 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
AP3B1O00203 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
AP3B1O00203 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
AP3B1O00203 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
AP3B1O00203 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC17.34■□□□□ 0.37
AP3B1O00203 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
AP3B1O00203 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
AP3B1O00203 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
AP3B1O00203 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC17.33■□□□□ 0.37
AP3B1O00203 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
AP3B1O00203 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
AP3B1O00203 AC092068.3-201ENST00000587894 2016 ntBASIC17.33■□□□□ 0.37
AP3B1O00203 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC17.33■□□□□ 0.37
AP3B1O00203 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.37
AP3B1O00203 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
AP3B1O00203 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
AP3B1O00203 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC17.33■□□□□ 0.37
AP3B1O00203 AC148477.5-201ENST00000625164 1645 ntBASIC17.33■□□□□ 0.37
AP3B1O00203 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
AP3B1O00203 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
AP3B1O00203 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC17.33■□□□□ 0.37
AP3B1O00203 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
AP3B1O00203 AP005117.1-201ENST00000584346 1413 ntBASIC17.33■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms