Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC19.29■□□□□ 0.68
DDX39AO00148 AC040169.1-201ENST00000565382 521 ntBASIC19.29■□□□□ 0.68
DDX39AO00148 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC19.29■□□□□ 0.68
DDX39AO00148 AC010507.1-201ENST00000633895 436 ntBASIC19.29■□□□□ 0.68
DDX39AO00148 AC092865.6-201ENST00000642101 219 ntBASIC19.29■□□□□ 0.68
DDX39AO00148 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
DDX39AO00148 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
DDX39AO00148 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC19.29■□□□□ 0.68
DDX39AO00148 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
DDX39AO00148 AC141586.5-201ENST00000624546 2050 ntBASIC19.29■□□□□ 0.68
DDX39AO00148 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
DDX39AO00148 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC19.29■□□□□ 0.68
DDX39AO00148 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
DDX39AO00148 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
DDX39AO00148 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC19.28■□□□□ 0.68
DDX39AO00148 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
DDX39AO00148 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
DDX39AO00148 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
DDX39AO00148 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
DDX39AO00148 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
DDX39AO00148 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
DDX39AO00148 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC19.28■□□□□ 0.68
DDX39AO00148 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
DDX39AO00148 COX10-202ENST00000429152 875 ntTSL 2 BASIC19.28■□□□□ 0.68
DDX39AO00148 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC19.28■□□□□ 0.68
DDX39AO00148 PAWRP1-201ENST00000451083 565 ntBASIC19.28■□□□□ 0.68
DDX39AO00148 AC087163.2-201ENST00000457299 853 ntBASIC19.28■□□□□ 0.68
DDX39AO00148 SLC25A6P2-201ENST00000497974 877 ntBASIC19.28■□□□□ 0.68
DDX39AO00148 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC19.28■□□□□ 0.68
DDX39AO00148 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
DDX39AO00148 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
DDX39AO00148 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC19.28■□□□□ 0.68
DDX39AO00148 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC19.28■□□□□ 0.68
DDX39AO00148 AC010327.4-202ENST00000591484 748 ntBASIC19.28■□□□□ 0.68
DDX39AO00148 AL513190.1-201ENST00000621254 727 ntBASIC19.28■□□□□ 0.68
DDX39AO00148 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC19.28■□□□□ 0.68
DDX39AO00148 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
DDX39AO00148 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
DDX39AO00148 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
DDX39AO00148 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
DDX39AO00148 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
DDX39AO00148 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC19.28■□□□□ 0.68
DDX39AO00148 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
DDX39AO00148 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
DDX39AO00148 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC19.27■□□□□ 0.68
DDX39AO00148 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
DDX39AO00148 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
DDX39AO00148 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
DDX39AO00148 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC19.27■□□□□ 0.68
DDX39AO00148 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
DDX39AO00148 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
DDX39AO00148 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
DDX39AO00148 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
DDX39AO00148 AC016396.2-201ENST00000562575 1417 ntBASIC19.27■□□□□ 0.68
DDX39AO00148 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
DDX39AO00148 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
DDX39AO00148 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC19.27■□□□□ 0.68
DDX39AO00148 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
DDX39AO00148 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
DDX39AO00148 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
DDX39AO00148 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
DDX39AO00148 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
DDX39AO00148 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
DDX39AO00148 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
DDX39AO00148 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
DDX39AO00148 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC19.27■□□□□ 0.68
DDX39AO00148 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC19.27■□□□□ 0.68
DDX39AO00148 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
DDX39AO00148 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC19.27■□□□□ 0.68
DDX39AO00148 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC19.27■□□□□ 0.68
DDX39AO00148 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC19.27■□□□□ 0.68
DDX39AO00148 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
DDX39AO00148 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
DDX39AO00148 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC19.27■□□□□ 0.68
DDX39AO00148 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
DDX39AO00148 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.67
DDX39AO00148 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.67
DDX39AO00148 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
DDX39AO00148 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC19.26■□□□□ 0.67
DDX39AO00148 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC19.26■□□□□ 0.67
DDX39AO00148 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
DDX39AO00148 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC19.26■□□□□ 0.67
DDX39AO00148 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC19.26■□□□□ 0.67
DDX39AO00148 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
DDX39AO00148 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC19.26■□□□□ 0.67
DDX39AO00148 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
DDX39AO00148 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
DDX39AO00148 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
DDX39AO00148 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
DDX39AO00148 YBX2P1-201ENST00000394192 760 ntBASIC19.26■□□□□ 0.67
DDX39AO00148 IMP4-203ENST00000409935 958 ntTSL 5 BASIC19.26■□□□□ 0.67
DDX39AO00148 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
DDX39AO00148 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
DDX39AO00148 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC19.26■□□□□ 0.67
DDX39AO00148 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC19.26■□□□□ 0.67
DDX39AO00148 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
DDX39AO00148 EGFEM1P-202ENST00000431685 1563 ntBASIC19.26■□□□□ 0.67
DDX39AO00148 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC19.26■□□□□ 0.67
DDX39AO00148 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
DDX39AO00148 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms