Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
TMEM88BA6NKF7 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC19.7■□□□□ 0.74
TMEM88BA6NKF7 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC19.7■□□□□ 0.74
TMEM88BA6NKF7 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
TMEM88BA6NKF7 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
TMEM88BA6NKF7 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
TMEM88BA6NKF7 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TMEM88BA6NKF7 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC19.69■□□□□ 0.74
TMEM88BA6NKF7 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TMEM88BA6NKF7 AL020996.1-203ENST00000536896 2307 ntBASIC19.69■□□□□ 0.74
TMEM88BA6NKF7 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC19.69■□□□□ 0.74
TMEM88BA6NKF7 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC19.69■□□□□ 0.74
TMEM88BA6NKF7 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TMEM88BA6NKF7 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC19.69■□□□□ 0.74
TMEM88BA6NKF7 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TMEM88BA6NKF7 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TMEM88BA6NKF7 STX1A-203ENST00000395155 783 ntTSL 2 BASIC19.69■□□□□ 0.74
TMEM88BA6NKF7 MEP1AP4-201ENST00000423244 1087 ntBASIC19.69■□□□□ 0.74
TMEM88BA6NKF7 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC19.69■□□□□ 0.74
TMEM88BA6NKF7 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC19.69■□□□□ 0.74
TMEM88BA6NKF7 GOLGA2P4-201ENST00000441462 777 ntBASIC19.69■□□□□ 0.74
TMEM88BA6NKF7 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC19.69■□□□□ 0.74
TMEM88BA6NKF7 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TMEM88BA6NKF7 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC19.69■□□□□ 0.74
TMEM88BA6NKF7 AC105021.1-202ENST00000570572 669 ntBASIC19.69■□□□□ 0.74
TMEM88BA6NKF7 AC015936.2-201ENST00000593177 259 ntBASIC19.69■□□□□ 0.74
TMEM88BA6NKF7 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC19.69■□□□□ 0.74
TMEM88BA6NKF7 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
TMEM88BA6NKF7 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC19.69■□□□□ 0.74
TMEM88BA6NKF7 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
TMEM88BA6NKF7 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
TMEM88BA6NKF7 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TMEM88BA6NKF7 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
TMEM88BA6NKF7 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TMEM88BA6NKF7 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC19.68■□□□□ 0.74
TMEM88BA6NKF7 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TMEM88BA6NKF7 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
TMEM88BA6NKF7 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
TMEM88BA6NKF7 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC19.68■□□□□ 0.74
TMEM88BA6NKF7 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TMEM88BA6NKF7 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC19.68■□□□□ 0.74
TMEM88BA6NKF7 APOC3-202ENST00000375345 604 ntTSL 5 BASIC19.68■□□□□ 0.74
TMEM88BA6NKF7 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
TMEM88BA6NKF7 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
TMEM88BA6NKF7 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC19.68■□□□□ 0.74
TMEM88BA6NKF7 AL355994.2-201ENST00000447882 704 ntBASIC19.68■□□□□ 0.74
TMEM88BA6NKF7 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC19.68■□□□□ 0.74
TMEM88BA6NKF7 AC099548.2-209ENST00000480264 625 ntBASIC19.68■□□□□ 0.74
TMEM88BA6NKF7 AC123567.1-201ENST00000548294 1261 ntBASIC19.68■□□□□ 0.74
TMEM88BA6NKF7 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC19.68■□□□□ 0.74
TMEM88BA6NKF7 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC19.68■□□□□ 0.74
TMEM88BA6NKF7 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TMEM88BA6NKF7 AL139099.5-201ENST00000635274 300 ntBASIC19.68■□□□□ 0.74
TMEM88BA6NKF7 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TMEM88BA6NKF7 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TMEM88BA6NKF7 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
TMEM88BA6NKF7 TUBB1P2-201ENST00000422712 1306 ntBASIC19.68■□□□□ 0.74
TMEM88BA6NKF7 TUBB1P1-201ENST00000503144 1300 ntBASIC19.68■□□□□ 0.74
TMEM88BA6NKF7 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TMEM88BA6NKF7 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TMEM88BA6NKF7 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TMEM88BA6NKF7 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC19.68■□□□□ 0.74
TMEM88BA6NKF7 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC19.68■□□□□ 0.74
TMEM88BA6NKF7 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TMEM88BA6NKF7 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
TMEM88BA6NKF7 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TMEM88BA6NKF7 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
TMEM88BA6NKF7 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
TMEM88BA6NKF7 FOXO1B-201ENST00000504678 1527 ntBASIC19.67■□□□□ 0.74
TMEM88BA6NKF7 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TMEM88BA6NKF7 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TMEM88BA6NKF7 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC19.67■□□□□ 0.74
TMEM88BA6NKF7 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC19.67■□□□□ 0.74
TMEM88BA6NKF7 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC19.67■□□□□ 0.74
TMEM88BA6NKF7 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC19.67■□□□□ 0.74
TMEM88BA6NKF7 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
TMEM88BA6NKF7 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TMEM88BA6NKF7 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TMEM88BA6NKF7 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC19.67■□□□□ 0.74
TMEM88BA6NKF7 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC19.67■□□□□ 0.74
TMEM88BA6NKF7 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC19.67■□□□□ 0.74
TMEM88BA6NKF7 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
TMEM88BA6NKF7 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC19.67■□□□□ 0.74
TMEM88BA6NKF7 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC19.67■□□□□ 0.74
TMEM88BA6NKF7 AC044860.1-202ENST00000559481 777 ntBASIC19.67■□□□□ 0.74
TMEM88BA6NKF7 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC19.67■□□□□ 0.74
TMEM88BA6NKF7 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC19.67■□□□□ 0.74
TMEM88BA6NKF7 AL133215.2-201ENST00000609242 977 ntBASIC19.67■□□□□ 0.74
TMEM88BA6NKF7 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC19.67■□□□□ 0.74
TMEM88BA6NKF7 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC19.67■□□□□ 0.74
TMEM88BA6NKF7 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
TMEM88BA6NKF7 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC19.67■□□□□ 0.74
TMEM88BA6NKF7 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TMEM88BA6NKF7 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TMEM88BA6NKF7 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
TMEM88BA6NKF7 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TMEM88BA6NKF7 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
TMEM88BA6NKF7 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
TMEM88BA6NKF7 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TMEM88BA6NKF7 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms