Protein–RNA interactions for Protein: A6NGU7

LINC01546, Putative uncharacterized protein encoded by LINC01546, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01546A6NGU7 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
LINC01546A6NGU7 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC12.11□□□□□ -0.47
LINC01546A6NGU7 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC12.11□□□□□ -0.47
LINC01546A6NGU7 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
LINC01546A6NGU7 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC12.11□□□□□ -0.47
LINC01546A6NGU7 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
LINC01546A6NGU7 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
LINC01546A6NGU7 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC12.11□□□□□ -0.47
LINC01546A6NGU7 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
LINC01546A6NGU7 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
LINC01546A6NGU7 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
LINC01546A6NGU7 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC12.11□□□□□ -0.47
LINC01546A6NGU7 TBC1D3P5-201ENST00000579401 1545 ntBASIC12.11□□□□□ -0.47
LINC01546A6NGU7 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
LINC01546A6NGU7 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
LINC01546A6NGU7 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC12.11□□□□□ -0.47
LINC01546A6NGU7 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
LINC01546A6NGU7 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
LINC01546A6NGU7 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC12.1□□□□□ -0.47
LINC01546A6NGU7 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
LINC01546A6NGU7 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC12.1□□□□□ -0.47
LINC01546A6NGU7 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC12.1□□□□□ -0.47
LINC01546A6NGU7 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC12.1□□□□□ -0.47
LINC01546A6NGU7 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC12.1□□□□□ -0.47
LINC01546A6NGU7 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
LINC01546A6NGU7 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC12.1□□□□□ -0.47
LINC01546A6NGU7 PKD1P1-201ENST00000458669 6805 ntBASIC12.1□□□□□ -0.47
LINC01546A6NGU7 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC12.1□□□□□ -0.47
LINC01546A6NGU7 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC12.1□□□□□ -0.47
LINC01546A6NGU7 GGT3P-204ENST00000453783 1664 ntBASIC12.1□□□□□ -0.47
LINC01546A6NGU7 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
LINC01546A6NGU7 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
LINC01546A6NGU7 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC12.1□□□□□ -0.47
LINC01546A6NGU7 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
LINC01546A6NGU7 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC12.1□□□□□ -0.47
LINC01546A6NGU7 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC12.1□□□□□ -0.47
LINC01546A6NGU7 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
LINC01546A6NGU7 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
LINC01546A6NGU7 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
LINC01546A6NGU7 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC12.1□□□□□ -0.47
LINC01546A6NGU7 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
LINC01546A6NGU7 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC12.1□□□□□ -0.47
LINC01546A6NGU7 AC112504.1-201ENST00000623415 1841 ntBASIC12.1□□□□□ -0.47
LINC01546A6NGU7 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
LINC01546A6NGU7 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC12.1□□□□□ -0.47
LINC01546A6NGU7 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
LINC01546A6NGU7 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
LINC01546A6NGU7 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
LINC01546A6NGU7 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
LINC01546A6NGU7 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC12.1□□□□□ -0.47
LINC01546A6NGU7 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC12.1□□□□□ -0.47
LINC01546A6NGU7 DUX4L17-201ENST00000557360 1267 ntBASIC12.1□□□□□ -0.47
LINC01546A6NGU7 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
LINC01546A6NGU7 TEN1-204ENST00000588202 862 ntTSL 3 BASIC12.1□□□□□ -0.47
LINC01546A6NGU7 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC12.1□□□□□ -0.47
LINC01546A6NGU7 MIR5787-201ENST00000611784 55 ntBASIC12.1□□□□□ -0.47
LINC01546A6NGU7 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC12.1□□□□□ -0.47
LINC01546A6NGU7 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
LINC01546A6NGU7 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
LINC01546A6NGU7 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
LINC01546A6NGU7 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
LINC01546A6NGU7 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
LINC01546A6NGU7 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC12.1□□□□□ -0.47
LINC01546A6NGU7 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
LINC01546A6NGU7 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
LINC01546A6NGU7 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
LINC01546A6NGU7 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC12.1□□□□□ -0.47
LINC01546A6NGU7 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC12.1□□□□□ -0.47
LINC01546A6NGU7 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC12.1□□□□□ -0.47
LINC01546A6NGU7 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
LINC01546A6NGU7 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
LINC01546A6NGU7 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
LINC01546A6NGU7 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC12.1□□□□□ -0.47
LINC01546A6NGU7 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
LINC01546A6NGU7 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC12.1□□□□□ -0.47
LINC01546A6NGU7 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC12.1□□□□□ -0.47
LINC01546A6NGU7 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
LINC01546A6NGU7 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
LINC01546A6NGU7 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC12.1□□□□□ -0.47
LINC01546A6NGU7 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
LINC01546A6NGU7 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
LINC01546A6NGU7 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
LINC01546A6NGU7 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC12.1□□□□□ -0.47
LINC01546A6NGU7 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
LINC01546A6NGU7 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
LINC01546A6NGU7 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
LINC01546A6NGU7 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC12.09□□□□□ -0.47
LINC01546A6NGU7 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
LINC01546A6NGU7 GCK-202ENST00000345378 2421 ntTSL 2 BASIC12.09□□□□□ -0.47
LINC01546A6NGU7 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC12.09□□□□□ -0.47
LINC01546A6NGU7 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
LINC01546A6NGU7 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC12.09□□□□□ -0.47
LINC01546A6NGU7 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
LINC01546A6NGU7 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
LINC01546A6NGU7 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
LINC01546A6NGU7 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
LINC01546A6NGU7 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC12.09□□□□□ -0.47
LINC01546A6NGU7 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
LINC01546A6NGU7 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
LINC01546A6NGU7 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 73.3 ms